DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and mec-7

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_509313.1 Gene:mec-7 / 181036 WormBaseID:WBGene00003171 Length:441 Species:Caenorhabditis elegans


Alignment Length:447 Identity:389/447 - (87%)
Similarity:422/447 - (94%) Gaps:10/447 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKY 65
            |||||::||||||||||:||||:||:|||||.:|.|||||||||||::||||||.:      .||
 Worm     1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGS------NKY 59

  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130
            ||||:|:|||||||:||||||:||||||||:|:|||||||||||||||||||||||||||||||.
 Worm    60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124

  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195
            |:.|||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||:
 Worm   125 ESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 189

  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260
            ||||||||.|:||||||||||||||||::.|:|||||||||.|||||||||||||||||||||||
 Worm   190 HQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 254

  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325
            ||||||||||||||||||||||.:|||||:||||||||.|||||||||||||||||||.||:|||
 Worm   255 VNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRG 319

  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQ 390
            ||||||||||||.:|||||||||:|||||||||||||||:|||||:|||||:|||||||||||||
 Worm   320 RMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQ 384

  Fly   391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDE----FDPE 443
            |:||||||||||||||||||||||||||||||||||||||||||.||::    ||.|
 Worm   385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAEAFDGE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 389/447 (87%)
beta_tubulin 2..432 CDD:276956 379/429 (88%)
mec-7NP_509313.1 PLN00220 1..426 CDD:215107 380/430 (88%)
beta_tubulin 2..426 CDD:276956 379/429 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S34
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.780

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