DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and AgaP_AGAP004914

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_315005.3 Gene:AgaP_AGAP004914 / 1275720 VectorBaseID:AGAP004914 Length:441 Species:Anopheles gambiae


Alignment Length:445 Identity:242/445 - (54%)
Similarity:328/445 - (73%) Gaps:8/445 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKY 65
            |||||....|||||::...|||.|.:||.:::.|.:.|...|.|:|::||::|:...      .:
Mosquito     1 MREIVVFHLGQCGNRVAENFWEYICDEHCLNTEGQFEGQHYLPLQRINVYFDESPCC------NF 59

  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130
            |||:|..||||.|:..:|...||.||.|::|:.|::.||||||:|::||||||:|.:.|..|:..
Mosquito    60 VPRSIFADLEPSTLNYLRCSRYGSLFSPESFISGKTSAGNNWARGYHTEGAELLDQIEDCTRRMV 124

  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195
            |.|||||||||.||:|||||||:||||:..:::.:|.:|.||:||:||||||:.|||||||..::
Mosquito   125 EGCDCLQGFQLVHSIGGGTGSGLGTLLLENLKDHFPGKITNTFSVIPSPKVSEVVVEPYNAVFAL 189

  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260
            ..::.::|||:|:|||||||||..||::..|...|||||::..|:|:|...|:|||||:|||||.
Mosquito   190 SSMIRSSDETFCLDNEALYDICVNTLRLPVPDLDDLNHLIASAMAGITCSFRYPGQLNSDLRKLL 254

  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325
            .||||:.|||||:||.|||.:|.|:.||..|||||..|:|...|:||||||:.|.:||.||:|||
Mosquito   255 TNMVPYRRLHFFVPGLAPLCARDSECYRQTTVPELVYQLFSTNNLMAACDPQLGTFLTAAAIFRG 319

  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQ 390
            |:|.:.|:|.|.:|:.||...|..:||||||:|:||:||:|:||::|||.|||:|.:||:||:.|
Mosquito   320 RLSTRTVEEHMGSVRLKNELSFSNFIPNNVKSAICDVPPRGMKMAATFIANTTSITQLFRRITGQ 384

  Fly   391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE--ATADDEFDPE 443
            |..|||::|||||||||||||.||||.|..:.|||.||..|:|  .|.||..|.:
Mosquito   385 FGTMFRQRAFLHWYTGEGMDEAEFTEMEKGLADLVEEYDSYKEEGRTKDDVEDDD 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 242/445 (54%)
beta_tubulin 2..432 CDD:276956 235/429 (55%)
AgaP_AGAP004914XP_315005.3 PTZ00010 1..427 CDD:240228 237/431 (55%)
beta_tubulin 2..425 CDD:276956 235/428 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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