DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and AgaP_AGAP002770

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_312152.5 Gene:AgaP_AGAP002770 / 1273198 VectorBaseID:AGAP002770 Length:436 Species:Anopheles gambiae


Alignment Length:440 Identity:163/440 - (37%)
Similarity:267/440 - (60%) Gaps:16/440 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYV 66
            |||:.|..||.|.|:.:..||:...||||..:|::. |..:. |..|.::    :..||  |:.|
Mosquito     5 REIIQLHVGQAGVQMASACWELYCLEHGIYPDGLFC-DCSIN-EDCSAFF----SCDRS--GQCV 61

  Fly    67 PRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKECE 131
            ||.:|:||||..::.:|.|.|..||.|::.:.|...|.:|:.:|||..|..:::..:|.:||.||
Mosquito    62 PRVLLVDLEPSVVDEIRIGTYRDLFHPNSLLTGCEDAASNFGRGHYRLGQTMIEPAMDRLRKLCE 126

  Fly   132 NCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIH 196
            :|..||||.:.||:|||||:|:||||:.::.|::.......:.:.||||:|..:||||||.|:.|
Mosquito   127 HCSSLQGFMMFHSVGGGTGAGLGTLLLERLGEDFGKASRMEFDIFPSPKISPVIVEPYNAILASH 191

  Fly   197 QLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV 261
            ..:|::|.|:.:|||||||:|.|:|.|..|:|.:||.||:..:|.||..|||.|.:|.||.:...
Mosquito   192 VAMEHSDCTFVLDNEALYDVCDRSLSVREPTYTNLNRLVAQAVSCVTASLRFSGAINVDLLEFQT 256

  Fly   262 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGR 326
            |:|||||:|:.:..:|||....:.::...|..:||.:.|:..|.:..||||.|||::...::||.
Mosquito   257 NLVPFPRIHYPLVTYAPLAPGSTARHEQPTTAQLTYECFEPGNQLVKCDPRAGRYMSCCLLYRGN 321

  Fly   327 MSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGL--------KMSSTFIGNTTAIQEL 383
            ::..|::..:|.:::..|..||:|.|...|..:...||..:        .::...:.|.|||:..
Mosquito   322 IAPIEINRALLEMRSNRSIQFVDWCPTGFKIGINFQPPIAVPGADLARSDLACCMLANNTAIRTA 386

  Fly   384 FKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 433
            :.|::::|..|:.||||.:.|..||::|.:.|||..|:..|:.:|::.::
Mosquito   387 WTRVADKFQRMYDRKAFFYHYLSEGLEEQDLTEAIENIRTLIKDYEEIEK 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 163/440 (37%)
beta_tubulin 2..432 CDD:276956 163/437 (37%)
AgaP_AGAP002770XP_312152.5 alpha_tubulin 5..434 CDD:276955 163/436 (37%)
PTZ00335 5..434 CDD:185562 163/436 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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