DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and TUBA1B

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_006073.2 Gene:TUBA1B / 10376 HGNCID:18809 Length:451 Species:Homo sapiens


Alignment Length:465 Identity:181/465 - (38%)
Similarity:273/465 - (58%) Gaps:35/465 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIY-----VGDSDLQLERVSVYYNEASAVTRS 60
            |||.:::..||.|.|||...||:...||||..:|..     :|..|   :..:.:::|..|    
Human     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD---DSFNTFFSETGA---- 58

  Fly    61 SGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDV 125
              ||:||||:.:||||..::.||:|.|.|||.|:..:.|:..|.||:|:||||.|.|::|.|||.
Human    59 --GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 121

  Fly   126 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 190
            :||..:.|..||||.:.||.|||||||..:||:.::..:|..:....:|:.|:|:||..||||||
Human   122 IRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 186

  Fly   191 ATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNAD 255
            :.|:.|..:|::|..:.:||||:||||.|.|.:..|:|.:||.|:|..:|.:|..|||.|.||.|
Human   187 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVD 251

  Fly   256 LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA 320
            |.:...|:||:||:||.:..:||:.|.....:..|:|.|:|...|:..|.|..||||||:|:...
Human   252 LTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316

  Fly   321 AVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNT 377
            .::||.:..|:|:..:..::.|.|..||:|.|...|..:...||        ..::.:...:.||
Human   317 LLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

  Fly   378 TAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDP 442
            |||.|.:.|:..:|..|:.::||:|||.||||:|.||:||..:|..|..:|:             
Human   382 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE------------- 433

  Fly   443 EVNQEEVEGD 452
            ||..:.|||:
Human   434 EVGVDSVEGE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 178/461 (39%)
beta_tubulin 2..432 CDD:276956 175/442 (40%)
TUBA1BNP_006073.2 PTZ00335 1..440 CDD:185562 178/460 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..451 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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