DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and Tubg1

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_598785.1 Gene:Tubg1 / 103733 MGIID:101834 Length:451 Species:Mus musculus


Alignment Length:451 Identity:155/451 - (34%)
Similarity:257/451 - (56%) Gaps:25/451 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYV 66
            |||:.||.||||||||.:||:.:..||||...||....:....:|..|::.:|      ....|:
Mouse     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQA------DDEHYI 61

  Fly    67 PRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQ--SGAGNNWAKGHYTEGAELVDNVLDVVRKE 129
            |||:||||||..:.|:.:..|.:|:.|:|....:  .|||||||.| :::|.::.:::.|::.:|
Mouse    62 PRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDRE 125

  Fly   130 CENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPS-PKVSDTVVEPYNATL 193
            .:..|.|:||.|.||:.||||||:|:.|:.::.:.||.:::.||||.|: .::||.||:|||:.|
Mouse   126 ADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLL 190

  Fly   194 SIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 258
            ::.:|.:|.|....:||.||..|....|.:.|||:..:|.|||..||..||.||:||.:|.||..
Mouse   191 TLKRLTQNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIG 255

  Fly   259 LAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR------- 315
            |..:::|.|||||.|.|:.|||:..| ...|..||.::.:::...||:|.:.    ||       
Mouse   256 LIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHC 316

  Fly   316 YLTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAV---CDIPPKGLKMSSTFIGNT 377
            |:.:..:.:|.:...:|.:.:..::.:..:.|:.|.|.:::.|:   ....|...::|...:.|.
Mouse   317 YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANH 381

  Fly   378 TAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD 438
            |:|..||:|...||..:.:|:||:..:..|.:.:..|.|.:::...:.....:|..||..|
Mouse   382 TSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEYHAATRPD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 155/451 (34%)
beta_tubulin 2..432 CDD:276956 151/443 (34%)
Tubg1NP_598785.1 gamma_tubulin 3..435 CDD:276957 151/442 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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