DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and tubz1

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_002941372.1 Gene:tubz1 / 100492972 XenbaseID:XB-GENE-5900222 Length:422 Species:Xenopus tropicalis


Alignment Length:470 Identity:120/470 - (25%)
Similarity:196/470 - (41%) Gaps:89/470 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYVPR 68
            ::.||.||||||||.::|.::...         ..|:|..     .|::....:          .
 Frog     3 LIWLQVGQCGNQIGQEWWHLLCNN---------ASDTDRY-----PYFSRDGMI----------N 43

  Fly    69 AILLDLEPGTM----ESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAE----LVDNVLDV 125
            ||.:|.||..:    :.|:.|.    .|..|.:.|:.|.|||||.|:..:|.:    |:...::.
 Frog    44 AICVDSEPKVIRKLWKRVKKGS----LRDSNLIVGRKGRGNNWAFGYSGDGTDTEKSLLARTMES 104

  Fly   126 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 190
            .|.|.|..||..|..|.|||.||||||:|..|..:||:.||...:.:.:|.|. :..||.::.||
 Frog   105 FRHELERRDCYSGTVLLHSLCGGTGSGLGARLCEEIRDTYPAGHILSVAVAPH-ETGDTPLQHYN 168

  Fly   191 ATLSIHQLVENTDETYCIDNEALYDICFRTLKVSN---PSYGDLNHLVSLTM--SGVTTCLR--- 247
            :.|.:..|...:|......|:   ||..|...:..   |....:...||:..  |.:.:||.   
 Frog   169 SLLCLSWLQRYSDGILLFQND---DIMHRVAALGEKKVPLVSGVEAPVSIAAMNSHIASCLAGLL 230

  Fly   248 FPGQLNADLRKLAVNMVPFPRLHFFMP-------GFAPLTSRGSQQYRALTVPELTQQMFDAKNM 305
            :|.........::|.:.|:..:....|       ..|.:..||:..:..:|: .||      ||:
 Frog   231 YPTNTLRTRSAVSVGIEPWEIIRTLCPMTTLKFLHTAQICRRGTPFWDRVTL-SLT------KNI 288

  Fly   306 -MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQN------KNSSYFVEWIP---------NN 354
             ..:.|.|.....::.||.|...     |:..|..|:      |.|...|.|.|         .|
 Frog   289 PRTSPDGRLHHSTSLLAVSRASQ-----DKPFLLSQDSVLMKLKQSYRCVPWNPFPIDYWTGSQN 348

  Fly   355 VKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAES 419
            :      :.|.....|.|...|.::..:|..|:.::..:|:..:|:||||...|.:|.:|..|..
 Frog   349 I------LDPSQQSHSLTVCANHSSAADLMSRVIQRAQSMYEARAYLHWYQRYGCEEEDFQGAFH 407

  Fly   420 NMNDLVSEYQQYQEA 434
            .::.:|.||.:..|:
 Frog   408 TLHSVVEEYNKLGES 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 120/470 (26%)
beta_tubulin 2..432 CDD:276956 119/466 (26%)
tubz1XP_002941372.1 delta_zeta_tubulin-like 2..417 CDD:276958 118/463 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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