DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and tuba1l

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_031749744.1 Gene:tuba1l / 100144986 XenbaseID:XB-GENE-5845222 Length:486 Species:Xenopus tropicalis


Alignment Length:457 Identity:178/457 - (38%)
Similarity:276/457 - (60%) Gaps:19/457 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDS-DLQLERVSVYYNEASAVTRSSGGKY 65
            ||::::..||.|.|||...||:...||||..:|..:.|. ..:.|..|.::||      :|||||
 Frog    40 REVISVHVGQAGVQIGNACWELYCLEHGILPDGRLLSDMFSEEDESFSTFFNE------TSGGKY 98

  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130
            ||.|:.:||||..::.||.|.|.:||.|:..:.|:..|.||:|:||||.|.|::|:||:.:||..
 Frog    99 VPHAVFVDLEPTVIDEVRKGSYRKLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLERIRKMA 163

  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195
            :.|:.||||.:.||.|||||||..:||:.::..||..:....:|:.|:||:|..||||||:.|:.
 Frog   164 DQCNALQGFLIFHSFGGGTGSGFSSLLMERLSVEYGRKSKLQFSIYPAPKMSTAVVEPYNSILTT 228

  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260
            |..:|::|..:.:||||:||||.|.|.:..|::.:||.|::..:|.:|..|||.|.||.||.:..
 Frog   229 HTTLEHSDCAFLVDNEAIYDICQRNLDIECPTHTNLNRLIAQIVSSITASLRFDGALNVDLAEFQ 293

  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325
            .|:|||||:||.:..:||..|.....:..|::.|:|...|:..|.|..|:||:|:|:....::||
 Frog   294 TNLVPFPRIHFPVVSYAPFISAERAYHEKLSIAEITSACFEPANQMVKCNPRNGKYMACCMLYRG 358

  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNTTAIQE 382
            .:..|:|:..:.::::|.:..||:|.|...|..:...||        ..::.:...:.|||||.|
 Frog   359 DVVPKDVNVAIASIKSKRTIQFVDWCPTGFKVGINYQPPTVVPGGDQAQMQRAVCMLSNTTAIAE 423

  Fly   383 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDPEVNQE 447
            .:..:..:|..|:.::||:|||.||||:|.||:||..:|..|..:|    |..|.|..:.|.:.|
 Frog   424 AWAHLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY----EEIACDYVEEEEDGE 484

  Fly   448 EV 449
            ||
 Frog   485 EV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 178/457 (39%)
beta_tubulin 2..432 CDD:276956 171/438 (39%)
tuba1lXP_031749744.1 alpha_tubulin 40..472 CDD:276955 172/441 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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