DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub60D and tuba1b

DIOPT Version :10

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0288686 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001107705.1 Gene:tuba1b / 100038108 XenbaseID:XB-GENE-22063827 Length:451 Species:Xenopus tropicalis


Alignment Length:465 Identity:181/465 - (38%)
Similarity:273/465 - (58%) Gaps:35/465 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIY-----VGDSDLQLERVSVYYNEASAVTRS 60
            |||.:::..||.|.|||...||:...||||..:|..     :|..|   :..:.:::|..|    
 Frog     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD---DSFNTFFSETGA---- 58

  Fly    61 SGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDV 125
              ||:||||:.:||||..::.||:|.|.|||.|:..:.|:..|.||:|:||||.|.|::|.|||.
 Frog    59 --GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 121

  Fly   126 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 190
            :||..:.|..||||.:.||.|||||||..:||:.::..:|..:....:|:.|:|:||..||||||
 Frog   122 IRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 186

  Fly   191 ATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNAD 255
            :.|:.|..:|::|..:.:||||:||||.|.|.:..|:|.:||.|:|..:|.:|..|||.|.||.|
 Frog   187 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVD 251

  Fly   256 LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA 320
            |.:...|:||:||:||.:..:||:.|.....:..|:|.|:|...|:..|.|..||||||:|:...
 Frog   252 LTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316

  Fly   321 AVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNT 377
            .::||.:..|:|:..:..::.|.|..||:|.|...|..:...||        ..::.:...:.||
 Frog   317 LLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

  Fly   378 TAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDP 442
            |||.|.:.|:..:|..|:.::||:|||.||||:|.||:||..:|..|..:|:             
 Frog   382 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE------------- 433

  Fly   443 EVNQEEVEGD 452
            ||..:.|||:
 Frog   434 EVGVDSVEGE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 178/461 (39%)
tuba1bNP_001107705.1 PTZ00335 1..440 CDD:185562 178/460 (39%)

Return to query results.
Submit another query.