DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp3 and Slc27a1

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_006253015.1 Gene:Slc27a1 / 94172 RGDID:620927 Length:649 Species:Rattus norvegicus


Alignment Length:615 Identity:262/615 - (42%)
Similarity:380/615 - (61%) Gaps:18/615 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 FVFALVMTASRDLKAFQRFVALNIYLLRKDRGGFTVARCFQDQARRRPKKTCFVMDDRHL--SFA 142
            |:..:..||.|||......:.:.:.|.|..|.|.|:.|.||..|:|:|::...|.....:  :||
  Rat    46 FLRIVCKTARRDLFGLSVLIRVRLELRRHRRAGDTIPRIFQAVAQRQPERLALVDASSGICWTFA 110

  Fly   143 EALEFSQKIAGYFSDRGLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIK 207
            :...:|..:|..|...|...||.||:.:|.|.|:..:||||::.||:.||:|.|||.|.|...:.
  Rat   111 QLDTYSNAVANLFLQLGFAPGDVVAVFLEGRPEFVGLWLGLAKAGVVAALLNVNLRREPLAFCLG 175

  Fly   208 VANAKALIVGSELLDVLVSLREKEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKKLE 272
            .:.|||||.|.|:...:..:  .|||.:         .:......||.|.:|...|.|......|
  Rat   176 TSAAKALIYGGEMAAAVAEV--SEQLGK---------SLLKFCSGDLGPESVLPDTQLLDPMLAE 229

  Fly   273 LPS---AVCPGEAR-SKLLYVYTSGTTGLPKAAVITNLRFLFMSAGSYYMLKMSSDDVVYDPLPL 333
            .|:   |..||:.. .:|.|:||||||||||||::.:.|:..::|..::...|.::||:||.|||
  Rat   230 APTTPLAQAPGKGMDDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGHHSYSMRANDVLYDCLPL 294

  Fly   334 YHTAGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKH 398
            ||:||.|:|||..|:.|.||||||||||..||.||.::||||.|||||:|||||.......:::|
  Rat   295 YHSAGNIMGVGQCIIYGLTVVLRKKFSASRFWDDCVKYNCTVVQYIGEICRYLLRQPVRDVERRH 359

  Fly   399 NLRLMYGNGLRPQIWSQFVRRFGIPHIGEIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQV 463
            ::||..||||||.||.:|.:|||:..|||.|||||.|.::.|:..:||:.||.....:.:||:::
  Rat   360 HVRLAVGNGLRPAIWEEFTQRFGVRQIGEFYGATECNCSIANMDGKVGSCGFNSRILTHVYPIRL 424

  Fly   464 LRCDEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDV 528
            ::.:|.|.|.|:||:|.||.||||:.|||||:::.:..:..|.||....|:.:|:..:||..||.
  Rat   425 VKVNEDTMEPLRDSQGLCIPCQPGEPGLLVGQINQQDPLRRFDGYVSDSATNKKIAHSVFRKGDS 489

  Fly   529 FFNSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKA 593
            .:.|||::|.|.|||.||:||:|||||||||||:|.||||:::..:|..|..||||.:|.|||||
  Rat   490 AYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEAVLSRLLGQTDVAVYGVAVPGVEGKA 554

  Fly   594 GMAAIVDPERKVDMDYLSVVLRGSLPPYARPLFIRLLDEIPRTATFKLKKRELAKEAYDIGQLSD 658
            |||||.||..::|.:.:...|:..|..||:|:|:|||.::..|.|||::|..|.:|.:|..|.||
  Rat   555 GMAAIADPHNQLDPNSMYQELQKVLASYAQPIFLRLLPQVDTTGTFKIQKTRLQREGFDPRQTSD 619

  Fly   659 PIYYLN-RDGIYRPLSQEQHELLRSGKAGL 687
            .:::|: :.|.|.||.:..|..:.:|...|
  Rat   620 RLFFLDLKQGRYLPLDERVHARICAGDFSL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 257/600 (43%)
hsFATP4_like 136..653 CDD:213305 232/522 (44%)
Slc27a1XP_006253015.1 PRK08279 45..649 CDD:236217 261/613 (43%)
AFD_class_I 107..614 CDD:302604 232/517 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342873
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1179
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63225
OrthoDB 1 1.010 - - D312083at2759
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - O PTHR43107
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X222
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.720

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