DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp3 and LOC568883

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_003199367.1 Gene:LOC568883 / 568883 -ID:- Length:640 Species:Danio rerio


Alignment Length:654 Identity:243/654 - (37%)
Similarity:363/654 - (55%) Gaps:62/654 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 WDNALASLTLGAVVALLLRNPTFVFALVMTASRDLKAFQRFVALNIY-----------LLRKDRG 111
            |  |:::|.:|.|..|:::               :|.:..|....:|           :.|..||
Zfish    25 W--AISTLAVGIVTLLIIQ---------------MKFYPYFWDDLMYYVKVRRVGWRMMARMKRG 72

  Fly   112 GFTVARCFQDQARRRPKKTCFVMDDRHLSFAEALEFSQKIAGYF-SDRGLERGDCVALLMETRLE 175
            ..|..:||:.||...|.|...|.:|:.|::.:....|.|:|... |.|||:.||.|||||....:
Zfish    73 VVTYLQCFELQATNIPDKPFIVFEDQTLTYRDVDVRSNKLANVLKSHRGLKHGDIVALLMNNEAD 137

  Fly   176 YPCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLDVLVSLREKEQLDEVPIYQ 240
            :.|:||||.:||...|.:|.|::.:||.|.:....||.|::||:|:         :.|||| :..
Zfish   138 FICVWLGLCKLGCEVAFLNFNIKSQSLQHCLDRCGAKTLVIGSDLV---------KSLDEV-LLM 192

  Fly   241 YTDDEVR-----GVAGHDLLPGAVDLVTALKTQKKLELPSAVCP-GEARSKLLYVYTSGTTGLPK 299
            .||..:.     ..:.|..:...:|.:.:...:|    |....| ....|..|:::|||||||||
Zfish   193 LTDGGIEIWVASESSSHQNVKTLLDKLDSASPEK----PVVDAPQPNLMSNFLFIFTSGTTGLPK 253

  Fly   300 AAVITNLRFLFMSAGSYYMLKM---SSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKFSA 361
            ||.|::::.:...|    .|::   .:||.:|..|||||.:..::|:|..|..|:|.||::||||
Zfish   254 AARISHIKAVMCMA----FLRLCGACADDKIYLTLPLYHMSASLLGIGGCIELGATCVLKRKFSA 314

  Fly   362 RNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLRLMYGNGLRPQIWSQFVRRFGIPHIG 426
            ..||.||.:::.||.||||||||||:....:.::..||:||..|:|||..:|.:|:||||...|.
Zfish   315 SQFWKDCLKYDITVFQYIGELCRYLVNQPKTLEEVAHNVRLAAGSGLRADVWKEFIRRFGKIQIR 379

  Fly   427 EIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGELLKDSKGHCIRCQPGQAGL 491
            |.||.||.:...:|.|:.:|.||....:.....|.:.|:||..|.|.|:...||||:...|:|||
Zfish   380 EAYGLTEASIGFVNYTDEIGPIGRASYFNKLNLPFEFLKCDPQTFEPLRTDTGHCIKVSKGEAGL 444

  Fly   492 LVGKVDARRAVSAFHGYA-DKGASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTFR 555
            ||..|   ...:.|.||| ||..||:||||:||.:|||:||:||::::|...:.|||||.|||||
Zfish   445 LVAPV---VFTNPFLGYAGDKAMSEKKLLRDVFKTGDVYFNTGDLMLQDHRDFVYFKDRIGDTFR 506

  Fly   556 WRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMAAIVDPE-RKVDMDYLSVVLRGSLP 619
            |:||||:|.||..::.:...|.|..||||.:|..||:|||||:|..: .::|...:...|..:||
Zfish   507 WKGENVSTTEVSEVLGSLDFLLDVNVYGVTVPGYEGRAGMAAVVLKDGHELDGKRVYSHLLHTLP 571

  Fly   620 PYARPLFIRLLDEIPRTATFKLKKRELAKEAYDIGQLSDPIYYLN-RDGIYRPLSQEQHELLRSG 683
            |||.|.|:||...:..|.|||.:|..|.|:.:....:..|:|.|: ....|.||:.:.::.:.||
Zfish   572 PYAWPWFLRLQTSLDMTDTFKQQKGLLVKQGFSPDTVQKPVYLLDTSQKTYTPLTAQLYDDVVSG 636

  Fly   684 KAGL 687
            |..|
Zfish   637 KIRL 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 234/617 (38%)
hsFATP4_like 136..653 CDD:213305 213/528 (40%)
LOC568883XP_003199367.1 PRK08279 80..640 CDD:236217 228/580 (39%)
AFD_class_I 97..630 CDD:302604 219/553 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - O PTHR43107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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