DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and slc27a4

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001017737.1 Gene:slc27a4 / 550432 ZFINID:ZDB-GENE-050417-248 Length:643 Species:Danio rerio


Alignment Length:677 Identity:268/677 - (39%)
Similarity:391/677 - (57%) Gaps:59/677 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LKQKLATRLGTILLATVIFGAFCWDNALASLTL-----GAVVALLLRNPTFVFALVMTASRDLKA 94
            |:...||.|   |....:|....|...|.|:.:     |...:|      :||:  .|..|||.|
Zfish     2 LRLACATAL---LFVLRLFIGLPWWQVLPSILIFYVGSGGWKSL------YVFS--KTIYRDLHA 55

  Fly    95 FQRFVALNIYLLRKDRGGFTVARCFQDQARRRPKKTCFVMD--DRHLSFAEALEFSQKIAGYFSD 157
            ....:.:.:.:.:..|...||.:.|....::...||..:.:  |...||.|..|:|.::|.:...
Zfish    56 ASVLLRVKLNVKKHLRERNTVPKLFAKSVKKYGNKTALIFEGTDEKWSFKELDEYSNRVANFLLQ 120

  Fly   158 RGLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLD 222
            :|...||.|||.||.|.:|..:|||::::||..||||.|||.|:|:|.:.:::|||::.||||.:
Zfish   121 QGFREGDVVALFMENRHQYVGLWLGMAKIGVEAALINFNLRLEALVHCVNISSAKAVVFGSELTE 185

  Fly   223 VLVSLREKEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKK------------LELPS 275
            .:..:                        |..:...|.|..:.:...|            ||..|
Zfish   186 AMCEV------------------------HSSMGKTVKLFVSGEWDPKRVPVGTEHLDPLLETTS 226

  Fly   276 AVCPGEA-RS---KLLYVYTSGTTGLPKAAVITNLRFLFMSAGSYYMLKMSSDDVVYDPLPLYHT 336
            .:.|.:. ||   :|.|:|||||||:||||::.:.|:..|:|..||..:|..:||:||.|||||:
Zfish   227 TIQPKQPDRSFTDRLFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFRMKPEDVLYDCLPLYHS 291

  Fly   337 AGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLR 401
            ||.|||:|..:::|.|||:||||||..||.||.::|||:.|||||:|||||.......::||.:|
Zfish   292 AGNIVGIGQGLIHGMTVVIRKKFSASKFWDDCIKYNCTIVQYIGEICRYLLNQPRKDTERKHKVR 356

  Fly   402 LMYGNGLRPQIWSQFVRRFGIPHIGEIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQVLRC 466
            :..|||||..||.:|..||.:|.|.|.|||||.|.:|.|..|:.||.||.......:||:::::.
Zfish   357 MALGNGLRQSIWEEFTNRFNVPQIAEFYGATECNCSLGNFDNKTGACGFNSRILPYVYPIRLVKV 421

  Fly   467 DEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFFN 531
            ||.|.||::...|.||.|.||:.|.|||::.....:..|.||.::.|:.:|:.::||..||..:.
Zfish   422 DEETMELIRGPDGVCIPCGPGEPGQLVGRIIQNDPLRRFDGYVNQTATNKKIAQDVFKKGDSAYL 486

  Fly   532 SGDMVVRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMA 596
            |||::|.|..||.||:|||||||||:||||:|.|||..::..:.::|.|||||::|..|||||||
Zfish   487 SGDVLVMDDFGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVEVPGAEGKAGMA 551

  Fly   597 AIVDPERKVDMDYLSVVLRGSLPPYARPLFIRLLDEIPRTATFKLKKRELAKEAYDIGQLSDPIY 661
            ||.|||...|:...|..|..:|||||||:|:|.|.|:.:|.|||.:|.::.::.:|...:||.:|
Zfish   552 AIADPENNTDLAKFSRDLEKALPPYARPVFLRFLPEVDKTGTFKFQKTDMRRDGFDPNIVSDKLY 616

  Fly   662 YLNR-DGIYRPLSQEQHELLRSGKAGL 687
            :|:| .|.|..|:.|.|..:.|||..|
Zfish   617 FLDRTKGQYVELNAELHRNIVSGKQKL 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 251/612 (41%)
hsFATP4_like 136..653 CDD:213305 229/532 (43%)
slc27a4NP_001017737.1 PRK08279 73..643 CDD:236217 248/593 (42%)
hsFATP4_like 99..608 CDD:213305 229/532 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583165
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1179
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63225
OrthoDB 1 1.010 - - D390277at33208
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - LDO PTHR43107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X222
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.720

Return to query results.
Submit another query.