DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp3 and zgc:101540

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001008639.1 Gene:zgc:101540 / 494096 ZFINID:ZDB-GENE-041212-67 Length:620 Species:Danio rerio


Alignment Length:639 Identity:237/639 - (37%)
Similarity:359/639 - (56%) Gaps:37/639 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FCWDNALASLTLGAVVALLLRNPTFVFALVMTASRDLKAFQRFVALNIYLLRKDRGGFTVARCFQ 120
            :.|..|||.|.|  ::..||:  ||....:.......:|....|.||||  ::....:::..||.
Zfish     2 YVWMTALAGLAL--LLPALLK--TFFPYFLQDCVYIYRALGCGVRLNIY--KRKTPFYSIVDCFL 60

  Fly   121 DQARRRPKKTCFVMDDRHLSFAEALEFSQKIAGYF-SDRGLERGDCVALLMETRLEYPCIWLGLS 184
            :..::.|:|.....:....|:.|..:.|.|:|... |..||..||.|||.:.....:...||||:
Zfish    61 EAVKKHPRKAFIHFEGETFSYEEVEKRSNKVADALRSVVGLREGDTVALFLGNEPRFVWTWLGLA 125

  Fly   185 QLGVITALINSNLRGESLLHSIKVANAKALIVGSELLD----VLVSLREKEQLDEVPIY----QY 241
            :||...||:|.|:|.:||||......|..||..:||||    :|.:|::|    .:.:|    :.
Zfish   126 KLGCPAALLNFNIRSKSLLHCFSCCGANVLIADAELLDAVEEILPALKQK----GIRVYLLSSEC 186

  Fly   242 TDDEVRGVAGHDLLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGLPKAAVITNL 306
            |.:.|:.:..  .:.||.|         |...||.......||..||:||||||||||||.:|:.
Zfish   187 TTEGVQCIGA--AIAGASD---------KAISPSLRSNVHIRSTALYIYTSGTTGLPKAAYVTHE 240

  Fly   307 RFLFMSAGSYYMLKMSSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRH 371
            | ::.|:....:..::|:|:.|..|||||:||.::|:...|..|||.|||:||||..||.||.::
Zfish   241 R-VWASSFIQGVCGVTSEDIFYINLPLYHSAGFLIGLVGCIERGSTFVLRRKFSASQFWDDCRKY 304

  Fly   372 NCTVAQYIGELCRYLLATSYSPDQQKHNLRLMYGNGLRPQIWSQFVRRFGIPHIGEIYGATEGNS 436
            |.||.|||||..|||..|....:.:.|.:::..|||:|..||.:|::|||..|:.|:|.|||||.
Zfish   305 NITVMQYIGETLRYLCNTPQKDNDRDHKVKIAIGNGVRADIWKEFLKRFGRIHVRELYAATEGNV 369

  Fly   437 NLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARRA 501
            ..||.|::||.:|.:.:.....:|..:::.|....|.:::::|.||..:..:.||||||:...  
Zfish   370 GFINYTDKVGVVGRINIISKLFFPFALIKFDIEKEEPVRNAEGFCIPVERDEVGLLVGKITKH-- 432

  Fly   502 VSAFHGYA-DKGASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQE 565
             :.|.||| :|..:::|.|.:||..||::|:|||::..|...:.||:||.||||||:||||||.|
Zfish   433 -TPFVGYAGNKQQTDKKRLADVFEKGDLYFHSGDLLRIDHQNFVYFQDRVGDTFRWKGENVATTE 496

  Fly   566 VEAIITNCVGLEDCVVYGVQIPHVEGKAGMAAIVDPE-RKVDMDYLSVVLRGSLPPYARPLFIRL 629
            |..|:|....:|:..||||::...||:.||||:...| |:.|......||...||.||||.|||:
Zfish   497 VADILTMVDCIEEANVYGVKVEGHEGRIGMAAVKLKEGREFDCVSTCSVLANYLPVYARPRFIRI 561

  Fly   630 LDEIPRTATFKLKKRELAKEAYDIGQLSDPIYYLN-RDGIYRPLSQEQHELLRS 682
            .:.:..|.|||:.|.:|.:|.::...:.|.:::|: ....|.||||:.:..:.|
Zfish   562 QNSLEVTGTFKMMKVKLVEEGFNPALIEDSLFFLDLTQKKYIPLSQDIYNSIMS 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 227/605 (38%)
hsFATP4_like 136..653 CDD:213305 209/527 (40%)
zgc:101540NP_001008639.1 PRK08279 43..620 CDD:236217 225/594 (38%)
hsFATP2a_ACSVL_like 76..610 CDD:213304 216/552 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - O PTHR43107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X222
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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