DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and CG11453

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_650832.1 Gene:CG11453 / 42355 FlyBaseID:FBgn0038734 Length:539 Species:Drosophila melanogaster


Alignment Length:580 Identity:122/580 - (21%)
Similarity:221/580 - (38%) Gaps:144/580 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 RRRPKKTCFVMDDR--HLSFAEALEFSQKIAGYFSDRGLERGDCVALL-METRLEYPCIWLGLSQ 185
            |..|...|.:.|..  .|:..||:.|:.:||......||::.|.|.:: ..|....|.: ||...
  Fly    39 RNHPNSICQISDTEGTALTNGEAITFAIRIAQQLKAMGLKQDDVVGIVGTNTTYLMPVV-LGCLL 102

  Fly   186 LGVITALINSNLRGESLLHSIKVANAKALIVGS---ELLDVLVSLREKEQLDEVPIYQYTDDEVR 247
            .|.....::.....:::.|...:...|.:....   :.|.::..:.:..      :|...|    
  Fly   103 NGTPFHAVSPWQDEDTIKHLFSITRPKLIFCDGKCFQRLSIIARILKSH------VYTLKD---- 157

  Fly   248 GVAGHDL-LPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGLPKAAVITNLRFLF- 310
                |.| :|...||:.. .|.:...:|..:..|...: :..:.||||||||||..|:|...|| 
  Fly   158 ----HRLGMPRVEDLLEP-TTAELYYVPETLLLGGDHT-VAILCTSGTTGLPKAVCISNSACLFD 216

  Fly   311 --MSAGSYYMLKMSSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHNC 373
              ...|...:|..|:.|          .:.|:..:..:..:|||.::            .||   
  Fly   217 FGFVTGQDVLLSFSTID----------WSAGMFNMLFSCCHGSTRII------------TDR--- 256

  Fly   374 TVAQYIGELCRYLLATSYSPDQ-----QKHNLRLMYGNGLRPQIWSQFVRRFGIPHIGEIYGATE 433
                            .|:|:.     :|:.:.|:   .:.||   |.......|.:.:      
  Fly   257 ----------------PYTPEYMIQLVEKYKVTLL---TVVPQ---QVASLLKTPTLNK------ 293

  Fly   434 GNSNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEY--TGELLKDSKGHCI-RC----------Q 485
                     .|:.:|.||.|.|.|.|...:|:..|:  ||::   |.|:.: .|          :
  Fly   294 ---------QRLASIRFVSVGGGSCYVANLLKLQEFLITGQI---SYGYALTECGGVAANMGVAK 346

  Fly   486 PGQAGLLVGKV------DARRAVSAFHG----------------YADKGASEQKLLRNVFTSGDV 528
            |...|.:|..|      :|.|::.  ||                ||:  .:|.|.:::.    ..
  Fly   347 PSSVGRIVPGVRVKILDEAGRSLG--HGETGEILVHNGKVWNGYYAN--PNESKRMQDY----QG 403

  Fly   529 FFNSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKA 593
            :|::|||...|...|.:..:|..|..|:.|...:.||:|.:|.....:.:..|:|:. ..|:|..
  Fly   404 WFHTGDMGYFDNENYLHIVERKEDLLRFHGAQYSPQEIEQVIAELPDVIEACVFGLW-NEVDGDP 467

  Fly   594 GMAAIV--DPERKVDMDYLSVVLRGSLPPYAR-PLFIRLLDEIPRTATFKLKKRELAKEA 650
            ..||:|  ...|..:||.:..|.:..:..:.: ...:..|.|:|:|.:.|:.:::...:|
  Fly   468 AAAAVVKIPGSRLTEMDIVEYVAKRLVVDHKQLHCGVFFLPELPKTGSGKVLRQQARDQA 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 122/580 (21%)
hsFATP4_like 136..653 CDD:213305 118/568 (21%)
CG11453NP_650832.1 CaiC 18..530 CDD:223395 122/580 (21%)
Firefly_Luc_like 46..519 CDD:213279 119/563 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452213
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.