DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and CG4830

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster


Alignment Length:571 Identity:130/571 - (22%)
Similarity:229/571 - (40%) Gaps:118/571 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 TVARCFQDQARRRPKKTCFVMDDR--HLSFAEALEFSQKIAGYFSDRGLERGDCVAL-------L 169
            ::.|......|..||..|.:.|..  .::|.:||.::.:||.....|||:..|.:.:       :
  Fly    29 SLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYI 93

  Fly   170 METRLEYPCIWLGLSQLGVITALINSN--LRGESLLHSIKVANAKALIVGSELLDVLVSLREKEQ 232
            |.|.:  .|.:.|       |...::|  |...:|.|...::..|.:...::..|.|.|.....:
  Fly    94 MPTAV--ACFFHG-------TPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSATSAFK 149

  Fly   233 LDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGL 297
             .|:.:...|.|.|..:.         ||:...||:...: |:.:..|.::: :..:.:|||||:
  Fly   150 -PEIILTTGTKDGVLSIQ---------DLLAPTKTEFFYQ-PTPLKEGPSQT-VAILTSSGTTGM 202

  Fly   298 PKAAVITNLRFLFMSAGSYYMLKMSSDDVV----YDPLPLYHTAGGIVGVGNAI---LNGST-VV 354
            |||..|:|              .:.:.:.|    ||.:.:..:...|.|:...|   :||.| ::
  Fly   203 PKAVCISN--------------DILTQETVFVNGYDTIFISASLDWITGLWATIFSTVNGCTRII 253

  Fly   355 LRKKFSARNFWLDCDRHNCTVAQYIGELCRYLL-ATSYSPDQQKHNLRLMYGNGLRPQIWSQFVR 418
            ..|.|:|..|.....:::.|.|....|.|..|| ..:.:|::.....:|.:|.|...|...:.|:
  Fly   254 SSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVK 318

  Fly   419 RFGIPH--IGEIYGATEGNSNLINITNRVGAIGF------VPVYGSSLYPVQVLRCDEYTGELLK 475
            :.. |:  :...||.||           ||.|.|      :...|:.|..:||         .:.
  Fly   319 KLA-PNGVLNSSYGMTE-----------VGFIVFNHGHLKLTAAGNPLPGIQV---------KIV 362

  Fly   476 DSKGHCIRCQPGQAGL-LVGKVDARRAVSAFHGY-ADKGASEQKLLRNVFTSGDVFFNSGDMVVR 538
            |..|:       |.|: ..|::......| ::|| ||..|::      .....:.:|::|||...
  Fly   363 DDDGN-------QLGVNQTGEIIVHNGFS-WNGYFADPEATK------AMQDEEGWFHTGDMGYF 413

  Fly   539 DILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGV------QIPHVEGKAGMAA 597
            |...|.|..||..:..:|:|..:...||||:|.....::...|.||      .:|        .|
  Fly   414 DEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVP--------GA 470

  Fly   598 IVDPERKVDMDYLSVV--LRGSLPPYARPL--FIRLLDEIPRTATFKLKKR 644
            :|..|....:....|:  :...||...:.|  .::..||||:....|:.:|
  Fly   471 LVVREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKVVRR 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 130/571 (23%)
hsFATP4_like 136..653 CDD:213305 124/549 (23%)
CG4830NP_650160.1 CaiC 18..529 CDD:223395 130/571 (23%)
AFD_class_I 46..518 CDD:302604 124/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452206
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.