DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp3 and CG3961

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:772 Identity:144/772 - (18%)
Similarity:262/772 - (33%) Gaps:249/772 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 AFCWD----------NALASLTLGAVVALLLRNPTFVFALVMTASRDLKAFQ------------- 96
            ::.||          ..|.:||||::.|    :..:.||......|.|...:             
  Fly    20 SYFWDEIDGYLYYLGGTLGTLTLGSLAA----SVAYYFATRPVPERPLVPLENQSPLLEGPEQIH 80

  Fly    97 -----------RFVALNIYLLRKDRGGFTVARCFQDQARRRPKKTCFVMDD------RHLSFAEA 144
                       :||:   |:....|   |:.:.|::.|.......|....:      :.:::.||
  Fly    81 VSKFYKESKNGKFVS---YITENVR---TLYQTFREGAYASNNGPCLGWRETLTSPYQWINYDEA 139

  Fly   145 LEFSQKIAGYFSDRGLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIKVA 209
            |..::.........|......:.:..:.|.|:.....|.....::...:...|..::....|:..
  Fly   140 LLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQT 204

  Fly   210 NAKALIVGSE------------LLDVLVSLR-------EKEQLDEVPIYQYTDDEVRGVAGH--D 253
            :.:.:||..:            .|.::|:::       |:.:...:.|:.:.|.|..|..|:  :
  Fly   205 DMQVVIVEDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHPE 269

  Fly   254 LLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGLPKAAVITN------LRFLFMS 312
            :.|.|.||.|             ||           |||||||.||..::|:      :..:.:.
  Fly   270 VPPTAEDLCT-------------VC-----------YTSGTTGNPKGVMLTHGNVVAGVCSVILQ 310

  Fly   313 AGSYYMLKMSSDDVVYDPLPLYHT-----------AGGIVGVGNA-------------------- 346
            .|.:   ::.:.||:...|||.|.           .||.||..:.                    
  Fly   311 MGDH---RIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAV 372

  Fly   347 --ILNGSTVVLRKKFSARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPD----QQKH-----NL 400
              :||.....::...||..  |.....|..:.....|:.|.:|..:...|    ::.|     ||
  Fly   373 PRLLNRVYDKIQNDISASG--LKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNL 435

  Fly   401 RLMY-------GNGLRPQIWSQFVRRFGIPHIGEIYGATEGNSNLI------NITNRVG------ 446
            |||.       ||.|      .|:|......:.|.||.||....:.      ::.|.||      
  Fly   436 RLMVVGSAPLAGNVL------TFMRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCN 494

  Fly   447 AIGFVPVYGSSLYPVQVLRCDEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADK 511
            |:..|.|      |......::.|||:       |:                 |..:.||||.  
  Fly   495 AVKLVDV------PEMEYFANQNTGEV-------CV-----------------RGSNVFHGYY-- 527

  Fly   512 GASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTFRW-RGENVATQEVEAIITNCVG 575
             ...:|....:.:.|  :.::||:.:....|.....||....|:. :||.:..:::|.|.|....
  Fly   528 -KDPEKTAEAIDSEG--WHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQY 589

  Fly   576 LEDCVVYGVQIPHVEGKAGMAAIVDPERKVDMDY---------LSV---------VLRGSLPPYA 622
            :....|||..:     |:.:.|:|.|:..|...:         |||         ::...:..:.
  Fly   590 VNQVYVYGESL-----KSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELIMNDMLNWG 649

  Fly   623 RPLFIRLLDEIP---------------RTATFKLKKRELAKEAYDIGQLSDPIYYLN 664
            :...::..:::.               .|.|||.|:.:|  ::|...||.|...:|:
  Fly   650 KQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQL--KSYFKPQLEDMYKHLD 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 134/727 (18%)
hsFATP4_like 136..653 CDD:213305 120/644 (19%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 123/647 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452201
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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