DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp3 and CG5568

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster


Alignment Length:517 Identity:120/517 - (23%)
Similarity:186/517 - (35%) Gaps:141/517 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VMDDRHLSFAEALEFSQKIAGYFSDRGLERGDCVALLME-----TRLEYPCIWLGLSQLGVITAL 192
            |.::..|::.:....:.|:|.|....|||:||.|.::..     |.|.|.|.:.|.....:.|..
  Fly    59 VTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEY 123

  Fly   193 INSNLRGESLLHSIKVANAKALIV--GSELLDVLVSLREKEQLDEVPIYQYTDDEVRGVAGHDLL 255
            ..|.:  |.|....|    ..||.  |.|.        ||.|.           ..:|:      
  Fly   124 EQSAI--ERLFGITK----PRLIFCDGDEF--------EKVQA-----------ATKGL------ 157

  Fly   256 PGAVDLVT-------ALKTQKKLELPSAVCPGEARSK------LLYVYTSGTTGLPKAAVITNLR 307
              .|.:||       .|:.|..|..|..:.....|.|      |..:.:|||:|||||..|:|..
  Fly   158 --QVQIVTMRNHPAGILRIQDILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSH 220

  Fly   308 FLFMSAGSYYMLKMSSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHN 372
            .:.   ||:  |.:.|..:.|:|..| ..|.||....||.:          ||..:...|||   
  Fly   221 QII---GSF--LPVDSSIIQYNPNTL-DWASGITMTINAAV----------FSLTSIIEDCD--- 266

  Fly   373 CTVAQYIGELCRYLLATSYSPDQQ------------------KH------NLRLMYGNGLRPQIW 413
            ...|...|.:.:|.::..:....|                  |:      |..|...|.:|.::.
  Fly   267 FDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEFYAADLSSVKYFFYGGSNCSLEVQNKIRSRLS 331

  Fly   414 SQFVRRFGIPHIGEIYGATEGNS------NLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGE 472
            ::.| .|.       |..||.||      |.....|.||.    ||.|..:..|..|      ||
  Fly   332 NECV-NFS-------YTLTELNSPGCLNFNFDEKPNSVGR----PVRGIQIKIVNEL------GE 378

  Fly   473 LLKDSKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFFNSGDMVV 537
                          .|...:||::..... ..:.||. |...|.|.:::    .:.:|::||:..
  Fly   379 --------------AQGPNVVGEICFNNG-QKWPGYY-KNPEETKKMQD----SENWFHTGDLGY 423

  Fly   538 RDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMAAIV 599
            .|..||.:..||..|..:::.......|:|::|.....:.:..|:|:..| |.|....|::|
  Fly   424 MDEDGYLFIIDRLKDMLKYQTIMYYPSEIESVIAEMPNVVEACVFGIWDP-VYGDKAAASVV 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 120/517 (23%)
hsFATP4_like 136..653 CDD:213305 119/514 (23%)
CG5568NP_647992.1 CaiC 35..540 CDD:223395 120/517 (23%)
Firefly_Luc_like 55..530 CDD:213279 120/517 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452204
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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