DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and CG17999

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster


Alignment Length:549 Identity:111/549 - (20%)
Similarity:212/549 - (38%) Gaps:107/549 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 RHLSFAEALEFSQKIAGYFSDRGLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGES 201
            :.|:.|:..:.|.:||..|...||.|||.|.:..........:.:.....|:....::.....|:
  Fly    53 QELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEET 117

  Fly   202 LLHSIKVANAKALIVGSELLDVLVSLREKEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALK 266
            :.:...:...|.:....|...::.::..|.| :...||.     |.|     .|.|.:|:...|.
  Fly   118 VKYMYDITEPKVIFCDVENYHIIKTVNGKLQ-NPAKIYL-----VNG-----KLEGVLDISEMLN 171

  Fly   267 TQKKLELPSAV-CP---GEARSKLLYVYTSGTTGLPKAAVITNLRFL--FMSAGSYYMLKMSSDD 325
            .:..:...:.| ||   |:..:  ..|.:|||||:||....::...|  ..:..:|     :.|.
  Fly   172 DEDSITAAAYVPCPKLHGDHTA--FIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTY-----TRDS 229

  Fly   326 VVYDPLPLYHTAGGIVGVGNAILNG-STVVLRKKFSARNFWLDCDRHNCT---VAQYIGELCRYL 386
            |:....|||..:|.|:.:. ::||| ..::..:.:|.........||..|   :|.:     :..
  Fly   230 VLLSFSPLYWISGTIILLA-SLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASH-----QIA 288

  Fly   387 LATSYSPD-----QQKHNLRLMYGNG----------LRPQIWSQ-FVRRFGIPHIGEIYGATEGN 435
            |.:.:..|     .|..::|::.|.|          :...|.:| ||..:|:..:|         
  Fly   289 LLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMG--------- 344

  Fly   436 SNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARR 500
                .::..||  |.|...|..:..|::...|:     ||...|      ..:.|::..::..:.
  Fly   345 ----GLSKNVG--GPVGCEGKVMRNVELRVLDK-----LKMPLG------INEVGIIYARLRFKW 392

  Fly   501 AVSAFHGYADKGASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQE 565
            |     ||    ....:..|...:|..::|.:||:...|..||.|.:.|..|.|::....:..::
  Fly   393 A-----GY----YRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQ 448

  Fly   566 VEAIITNCVGLEDCVVYGV-----------QIPHVEGKAGMAAIVDPERKVDMDYLSVV--LRGS 617
            :|..|....|:.:..|:|:           .:...:...|.....|..|.:...:||..  :||.
  Fly   449 IEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERLTADHIRNIVEHHLSGAYHIRGG 513

  Fly   618 LPPYARPLFIRLLDEIPRTATFKLKKREL 646
                     :..:|.:|:|...||::|::
  Fly   514 ---------VYFIDSLPKTPNDKLQRRKV 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 111/549 (20%)
hsFATP4_like 136..653 CDD:213305 111/549 (20%)
CG17999NP_611517.1 CaiC 25..545 CDD:223395 111/549 (20%)
AFD_class_I 38..529 CDD:302604 109/543 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452212
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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