DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and acsbg2

DIOPT Version :10

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001119851.1 Gene:acsbg2 / 335159 ZFINID:ZDB-GENE-030131-7099 Length:752 Species:Danio rerio


Alignment Length:565 Identity:106/565 - (18%)
Similarity:187/565 - (33%) Gaps:172/565 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LSFAEALEFSQKIAGYFSDRGLERGDCVALLMETRLEY-----PCIWLGLSQLGVITA------- 191
            ::::|..:..:..|..|...||||...|.:|.....|:     ..|..|...:|:.|.       
Zfish   147 MTYSEYYKSCRTAAKSFLKLGLERYHGVGILGFNSTEWFIADIAAILAGGFAVGIYTTNSPEACQ 211

  Fly   192 LINSNLRGESLLHSIKVANAKALIVGSELLDVLVSLRE----KEQLDEVPIYQYTDDEVRGVAGH 252
            .:..|.:...|:    |.|.|.|....::.|.|..|:.    |::|.|.....||..|...: |.
Zfish   212 YVAENCQANILV----VENHKQLQKILQIQDKLPHLKAIIQYKDELKEKKPNLYTWAEFMEL-GR 271

  Fly   253 DLLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGLPKAAVIT--NLRFLFMSAGS 315
            |.....:|.:  :.:||    |:..|        ..:|||||||.||..:::  ||.:..::...
Zfish   272 DEPDTQLDDI--ISSQK----PNQCC--------TLIYTSGTTGQPKGVMLSHDNLTWTAVATSQ 322

  Fly   316 YYMLKMSS--DDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHNCTVAQY 378
            :..|..:.  .:||...|||.|.|..::.:                     ||.......|   |
Zfish   323 HVSLNDADKLQEVVVSYLPLSHIAAQMIDI---------------------WLPMKAGGVT---Y 363

  Fly   379 IGELCRYLLATSYSPDQQKHNLRLMYGNGLR----------PQIWSQFVRRFGIPHIGEIYGATE 433
            ..:           ||..|.:|    .|.||          |::|.:...:.      :..||..
Zfish   364 FAQ-----------PDALKGSL----ANTLREIRPTAFLGVPRVWEKMQEKM------KSIGAKS 407

  Fly   434 GNSNLINITNRVGA----IGF------VPVYGSSLYPVQVLRCDEYTGELLKDSKG--HCIRCQP 486
            .     .:..:|.:    :|.      :.:..:|..|:............::.:.|  .|.||..
Zfish   408 S-----TVRRKVASWAKDVGLQTNLNKMELGSNSRKPLNYRLAKHLVFRKVRKALGLDRCTRCYT 467

  Fly   487 GQAGLLVGKVDARRAVS----AFHGYADKGASEQKLLRNVF----------------------TS 525
            |.|.:....::...::.    ..:|.::..........|.|                      .:
Zfish   468 GAAPITKDTLEFFLSLDIPLFELYGMSESSGPHTITQANAFRLTSCGKVIPGCKTKLSNPDDEKN 532

  Fly   526 GDVFFNSGDMVVRDILGYFYFKDRTGDTFRWRG-----------EN---VATQEVEAIITNCVG- 575
            |::.|....:    .:||....|:|.:.....|           ||   ..|..::.:|....| 
Zfish   533 GEICFWGRHV----FMGYLNMPDKTEEALDAEGWLHSGDLGKLDENNFLFITGRIKELIITAGGE 593

  Fly   576 ------LEDCVVYGVQIPHVEGKAGMAAIVDPERKVDMDYLSVVL 614
                  :||.|...  ||.:..    |.::..:||    :||::|
Zfish   594 NIPPVPIEDAVKEA--IPLISN----AMLIGDKRK----FLSMLL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 hsFATP4_like 136..653 CDD:341262 106/565 (19%)
acsbg2NP_001119851.1 ACSBG_like 139..736 CDD:341256 106/565 (19%)

Return to query results.
Submit another query.