DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and Slc27a4

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001094176.1 Gene:Slc27a4 / 311839 RGDID:1307383 Length:643 Species:Rattus norvegicus


Alignment Length:672 Identity:271/672 - (40%)
Similarity:386/672 - (57%) Gaps:58/672 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LGTILLATVIFGAFC----WDNALASLTLGAVVALLLRNP--TFVFALVMTASRDLKAFQRFVAL 101
            ||..|:..::|....    |.....||.|     |.|.:.  .|:...:.|..||:  |...|.|
  Rat     3 LGASLVGALLFSKLVLKLPWTQVGFSLLL-----LYLGSGGWRFIRVFIKTVRRDV--FGGMVLL 60

  Fly   102 NI------YLLRKDRGGFTVARCFQDQARRRPKKTCFVMD--DRHLSFAEALEFSQKIAGYFSDR 158
            .:      ||..:.    ||...|....||.|.||..:.:  :.|.:|.:..::|..:|.:...|
  Rat    61 KVKTKVRRYLQERK----TVPLLFASVVRRHPDKTALIFEGTNTHWTFRQLDDYSSSVANFLQAR 121

  Fly   159 GLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLDV 223
            ||..|:.|||.||.|.|:..:|||:::|||..||||:|||.::|.|.:..:.|:|||.|||:...
  Rat   122 GLVSGNVVALFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALRHCLDTSKARALIFGSEMASA 186

  Fly   224 LVSLREKEQLDEVPIYQYTDDEVRGVAGHDL------------LPGAVDLVTALKTQKKLELPSA 276
                          :|     |::.:....|            :|...:.:..|.......|||.
  Rat   187 --------------VY-----EIQAILDPTLTLFCSGSWEPSTVPANTEHLDPLLEDAPKHLPSI 232

  Fly   277 VCPGEARSKLLYVYTSGTTGLPKAAVITNLRFLFMSAGSYYMLKMSSDDVVYDPLPLYHTAGGIV 341
            ...| ...||.|:||||||||||||::.:.|:..|:|..||..:|..||:|||.|||||:||.||
  Rat   233 PDKG-FTDKLFYIYTSGTTGLPKAAIVVHSRYYRMAALVYYGFRMRPDDIVYDCLPLYHSAGNIV 296

  Fly   342 GVGNAILNGSTVVLRKKFSARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLRLMYGN 406
            |:|..:|:|.|||:||||||..||.||.::|||:.|||||||||||.......:.:|.:|:..||
  Rat   297 GIGQCVLHGMTVVIRKKFSASRFWDDCIKYNCTIVQYIGELCRYLLNQPPREAESRHKVRMALGN 361

  Fly   407 GLRPQIWSQFVRRFGIPHIGEIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTG 471
            |||..||:.|..||.||.:.|.|||||.|.:|.|..::|||.||.....|.:||::::|.:|.|.
  Rat   362 GLRQSIWTDFSSRFHIPQVAEFYGATECNCSLGNFDSQVGACGFNSRILSFVYPIRLVRVNEDTM 426

  Fly   472 ELLKDSKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFFNSGDMV 536
            ||::...|.||.|||||.|.|||::..:..:..|.||.::||:.:|:..:||..||..:.:||::
  Rat   427 ELIRGPDGVCIPCQPGQPGQLVGRIIQQDPLRRFDGYLNQGANNKKIASDVFKKGDQAYLTGDVL 491

  Fly   537 VRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMAAIVDP 601
            |.|.|||.||:|||||||||:||||:|.|||..::..:.:.|..||||::|..||:|||||:..|
  Rat   492 VMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLQMADVAVYGVEVPGAEGRAGMAAVASP 556

  Fly   602 ERKVDMDYLSVVLRGSLPPYARPLFIRLLDEIPRTATFKLKKRELAKEAYDIGQLSDPIYYLN-R 665
            ....|::..:..|:..||.||||:|:|.|.|:.:|.|||.:|.||.||.:|...:.||::||: |
  Rat   557 TSNCDLESFAQTLKKELPLYARPIFLRFLPELHKTGTFKFQKTELRKEGFDPSVVKDPLFYLDAR 621

  Fly   666 DGIYRPLSQEQHELLRSGKAGL 687
            .|.|..|.||.:..:::|:..|
  Rat   622 TGCYVALDQEAYTRIQAGEEKL 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 257/614 (42%)
hsFATP4_like 136..653 CDD:213305 231/528 (44%)
Slc27a4NP_001094176.1 PRK08279 75..643 CDD:236217 251/587 (43%)
hsFATP4_like 99..608 CDD:213305 231/528 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342994
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1179
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63225
OrthoDB 1 1.010 - - D390277at33208
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - LDO PTHR43107
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X222
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.720

Return to query results.
Submit another query.