DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and Acsl1

DIOPT Version :9

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:639 Identity:133/639 - (20%)
Similarity:219/639 - (34%) Gaps:182/639 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LSFAEALEFSQKIAGYFSDRGLERGDC----VALLMETRLEYPCIWLGLSQ-------------- 185
            :|:.:..|.::.|......:|.:  .|    :.:..:.|.|    |:.:.|              
  Rat   122 ISYKQVAEMAECIGSALIQKGFK--PCSEQFIGIFSQNRPE----WVTIEQGCFTYSMVVVPLYD 180

  Fly   186 -LG--VITALINSNLRGE-SLLHSIKVANAKALIVGSE-----LLDVLVSLREKEQLDEVPIYQY 241
             ||  .||.::|   :.| |::.:.|...||.|:.|.|     .|.::| :.:....|.|...|.
  Rat   181 TLGTDAITYIVN---KAELSVIFADKPEKAKLLLEGVENKLTPCLKIIV-IMDSYDNDLVERGQK 241

  Fly   242 TDDEVRGVAGHDLLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGLPKAAVITNL 306
            ...|:.|      |....||....:|:.|        |.|.....:..:||||||.||.|::|:.
  Rat   242 CGVEIIG------LKALEDLGRVNRTKPK--------PPEPEDLAIICFTSGTTGNPKGAMVTHQ 292

  Fly   307 RFL-----FMSAGSYYMLKMSSDDVVYDPLPLYHTAGGIV-------GVGNAILNGSTVVLRKKF 359
            ..:     |:.|.....: .|.:||:...|||.|....:|       |.......|...:|....
  Rat   293 NIMNDCSGFIKATESAFI-ASPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMDDL 356

  Fly   360 SA--------------RNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLR--LMYGNGL 408
            ..              |.|.....:.|.:|.       |:||  .::..:::..||  ::..|.|
  Rat   357 KVLQPTIFPVVPRLLNRMFDRIFGQANTSVK-------RWLL--DFASKRKEAELRSGIVRNNSL 412

  Fly   409 RPQIWSQFVRRFGIPHIGEIYGATEGNSNLINITNRVGAIGFVPVYGSSL-YPVQVLRCDEYTGE 472
                |.:.:       ..:|..:..|...|: ||      |..||..:.| :....|.|..|.|.
  Rat   413 ----WDKLI-------FHKIQSSLGGKVRLM-IT------GAAPVSATVLTFLRAALGCQFYEGY 459

  Fly   473 LLKDSKGHCIRCQPG--------------------------QAGLLVGKVDARRAVSAFHGYADK 511
            ...:....|....||                          ||....|:|..:.| :.|.||...
  Rat   460 GQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAAKGEGEVCVKGA-NVFKGYLKD 523

  Fly   512 GASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTFRW-RGENVATQEVEAIITNCVG 575
            .|...:.|     ..|.:.::||:......|.....||....|:. :||.:|.:::|.|......
  Rat   524 PARTAEAL-----DKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEA 583

  Fly   576 LEDCVVYGVQIPHVEGKAGMAAIVDPE---------------------RKVDM------DYLSVV 613
            :....|:|..:     :|.:.|||.|:                     |..|:      |.:.:.
  Rat   584 VAQVFVHGESL-----QAFLIAIVVPDVEILPSWAQKRGFQGSFEELCRNKDINKAILEDMVKLG 643

  Fly   614 LRGSLPPYARPLFIRL------LDEIPRTATFKLKKRELAKEAYDIGQLSDPIY 661
            ....|.|:.:...|.:      :|....|.|.|.|:.||..  |...|: |.:|
  Rat   644 KNAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRPELRN--YFRSQI-DELY 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 133/639 (21%)
hsFATP4_like 136..653 CDD:213305 130/629 (21%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 133/639 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342964
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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