DRSC/TRiP Functional Genomics Resources

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Protein Alignment nvy and Runx1t1

DIOPT Version :9

Sequence 1:NP_001261166.1 Gene:nvy / 37886 FlyBaseID:FBgn0005636 Length:757 Species:Drosophila melanogaster
Sequence 2:XP_006237963.1 Gene:Runx1t1 / 362489 RGDID:1305490 Length:604 Species:Rattus norvegicus


Alignment Length:663 Identity:186/663 - (28%)
Similarity:291/663 - (43%) Gaps:176/663 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RERDRLCRTPPDSPPD---SSRSLAPRSPHSPLQLHQHPQRNASVSP--VVNGSSSGGGGVGSSG 181
            ::|.....|.||||.|   .||...|..|..|..  |...|.:|.:|  :.||:|.....:..:.
  Rat    29 QDRTEKHSTMPDSPVDVKTQSRLTPPAMPPPPTT--QGAPRTSSFTPTTLTNGTSHSPTALNGAP 91

  Fly   182 TSP---TPTPGSQHAASLAAAAAAAAAAHVEQARLVSKMRKFLGALVQFSQELGQPEVCERVRAL 243
            :.|   :..|.|..::|||......|..    ||.:||:::||..|.||..:: .||:.||||.|
  Rat    92 SPPNGFSNGPSSSSSSSLANQQLPPACG----ARQLSKLKRFLTTLQQFGNDI-SPEIGERVRTL 151

  Fly   244 VLSLCSGSISVEEFRLALQEAINLPLRPYVVPLLKNSIALVQREILALARATNQSALQYVTNNEQ 308
            ||.|.:.::::|||...||||.|.||||:|:|.||.::.|:|||:|..||...|:..||:..:||
  Rat   152 VLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 216

  Fly   309 AVMEFAPHGVASAEFGDIFIQLEAPTSNGSSAVFKRRSSDSMME--------HGGHNG-----LQ 360
            .:::.:.  .:..:..::.:.:   ..||     |||:.|...|        |..|..     :.
  Rat   217 LLLDAST--TSPVDSSELLLDV---NENG-----KRRTPDRTKENGFDREPLHSEHPSKRPCTIS 271

  Fly   361 EWNEYMASGGAGY---------PPPPSK-RLT------------LHPAHSVV-----AYGEYGVS 398
            ....|..:.|..|         ||||.. ||.            .||:|..:     ..|.:|..
  Rat   272 PGQRYSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTR 336

  Fly   399 SAEGLPSAAAFMQRDERDLRMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWKNIHTML 463
            ..|.:            |.|:::.:                            ..||||::..:|
  Rat   337 QEEMI------------DHRLTDRE----------------------------WAEEWKHLDHLL 361

  Fly   464 NCISAMVDKTKRAITILQ-----------------------QRGIEPQHPNSGQE--VTPAAMA- 502
            |||..||:||:|::|:|:                       ::|......:|.|:  |.|..:| 
  Rat   362 NCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAEDLKKGGSGSSSHSRQQSPVNPDPVAL 426

  Fly   503 ELRRQTEEKVA------EFKRNAEDAVTQVKRQAVIEIQRAVVAAETRAAEIMTQERLRMEKFFM 561
            :..|:...:.|      |..:.||:||.:|||||:.|:|:||..||.:|.:::|.||.:||:...
  Rat   427 DAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITTERAKMERTVA 491

  Fly   562 EMSRHSSGERDLDNKSPSMASAQNGSNLQQQCWNCGRKATETCSGCNMARYCSASCQYRDWDSHH 626
            |..|.::.:        ::|......:..:.||||||||:|||||||.||||.:.||::||:.||
  Rat   492 EAKRQAAED--------ALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHH 548

  Fly   627 QVCGNTRASELSAKHLHSASNLSLRNAMATRSPPTPNSAAHLQAAAAAAAAAAGAREAVSAPVGG 691
            .:||.|                    ..|.:...||       |.:::...::||    .:|:..
  Rat   549 HICGQT--------------------LQAPQQGETP-------AVSSSVTPSSGA----GSPMDT 582

  Fly   692 PGAGIAVGTGAGS 704
            |.|.....|..|:
  Rat   583 PPAATPRSTTPGT 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nvyNP_001261166.1 TAFH 213..304 CDD:197785 43/90 (48%)
NHR2 <454..>482 CDD:285941 15/50 (30%)
zf-MYND 593..629 CDD:280009 25/35 (71%)
Runx1t1XP_006237963.1 TAFH 122..210 CDD:400078 41/88 (47%)
NHR2 337..403 CDD:370124 18/105 (17%)
NtpE 443..>514 CDD:224308 25/78 (32%)
zf-MYND 515..551 CDD:396356 25/35 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350402
Domainoid 1 1.000 89 1.000 Domainoid score I7654
eggNOG 1 0.900 - - E1_28KWJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 225 1.000 Inparanoid score I3411
OMA 1 1.010 - - QHG50012
OrthoDB 1 1.010 - - D198762at33208
OrthoFinder 1 1.000 - - FOG0001881
OrthoInspector 1 1.000 - - otm46393
orthoMCL 1 0.900 - - OOG6_103448
Panther 1 1.100 - - O PTHR10379
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1413
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.810

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