DRSC/TRiP Functional Genomics Resources

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Protein Alignment nvy and Runx1t1

DIOPT Version :9

Sequence 1:NP_001261166.1 Gene:nvy / 37886 FlyBaseID:FBgn0005636 Length:757 Species:Drosophila melanogaster
Sequence 2:XP_006537631.1 Gene:Runx1t1 / 12395 MGIID:104793 Length:627 Species:Mus musculus


Alignment Length:686 Identity:190/686 - (27%)
Similarity:294/686 - (42%) Gaps:199/686 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RERDRLCR-----------------------TPPDSPPD---SSRSLAPRSPHSPLQLHQHPQRN 160
            :|.||||.                       |.||||.|   .||...|..|..|..  |...|.
Mouse    29 QETDRLCESWVLKEGNNLFLVAFPDRTEKHSTMPDSPVDVKTQSRLTPPAMPPPPTT--QGAPRT 91

  Fly   161 ASVSP--VVNGSSSGGGGVGSSGTSP---TPTPGSQHAASLAAAAAAAAAAHVEQARLVSKMRKF 220
            :|.:|  :.||:|.....:..:.:.|   :..|.|..::|||......|..    ||.:||:::|
Mouse    92 SSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACG----ARQLSKLKRF 152

  Fly   221 LGALVQFSQELGQPEVCERVRALVLSLCSGSISVEEFRLALQEAINLPLRPYVVPLLKNSIALVQ 285
            |..|.||..:: .||:.||||.|||.|.:.::::|||...||||.|.||||:|:|.||.::.|:|
Mouse   153 LTTLQQFGNDI-SPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQ 216

  Fly   286 REILALARATNQSALQYVTNNEQAVMEFAPHGVASAEFGDIFIQLEAPTSNGSSAVFKRRSSDSM 350
            ||:|..||...|:..||:..:||.:::.:.  .:..:..::.:.:   ..||     |||:.|..
Mouse   217 RELLHCARLAKQNPAQYLAQHEQLLLDAST--TSPVDSSELLLDV---NENG-----KRRTPDRT 271

  Fly   351 ME--------HGGHNG-----LQEWNEYMASGGAGY---------PPPPSK-RLT---------- 382
            .|        |..|..     :.....|..:.|..|         ||||.. ||.          
Mouse   272 KENGFDREPLHSEHPSKRPCTISPGQRYSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRD 336

  Fly   383 --LHPAHSVV-----AYGEYGVSSAEGLPSAAAFMQRDERDLRMSEAQARHAAPPQRAGNPQPNP 440
              .||:|..:     ..|.:|....|.:            |.|:::.:                 
Mouse   337 SYRHPSHRDLRDRNRPMGLHGTRQEEMI------------DHRLTDRE----------------- 372

  Fly   441 NAAAPGAPGAGGEEEWKNIHTMLNCISAMVDKTKRAITILQ-----------------------Q 482
                       ..||||::..:||||..||:||:|::|:|:                       :
Mouse   373 -----------WAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAEDLK 426

  Fly   483 RGIEPQHPNSGQE--VTPAAMA-ELRRQTEEKVA------EFKRNAEDAVTQVKRQAVIEIQRAV 538
            :|......:|.|:  |.|..:| :..|:...:.|      |..:.||:||.:|||||:.|:|:||
Mouse   427 KGGSSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAV 491

  Fly   539 VAAETRAAEIMTQERLRMEKFFMEMSRHSSGERDLDNKSPSMASAQNGSNLQQQCWNCGRKATET 603
            ..||.:|.:::|.||.:||:...|..|.::.:        ::|......:..:.||||||||:||
Mouse   492 SEAERKAHDMITTERAKMERTVAEAKRQAAED--------ALAVINQQEDSSESCWNCGRKASET 548

  Fly   604 CSGCNMARYCSASCQYRDWDSHHQVCGNTRASELSAKHLHSASNLSLRNAMATRSPPTPNSAAHL 668
            |||||.||||.:.||::||:.||.:||.|                    ..|.:...||      
Mouse   549 CSGCNTARYCGSFCQHKDWEKHHHICGQT--------------------LQAPQQGDTP------ 587

  Fly   669 QAAAAAAAAAAGAREAVSAPVGGPGAGIAVGTGAGS 704
             |.:::...::||    .:|:..|.|.....|..|:
Mouse   588 -AVSSSVTPSSGA----GSPMDTPPAATPRSTTPGT 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nvyNP_001261166.1 TAFH 213..304 CDD:197785 43/90 (48%)
NHR2 <454..>482 CDD:285941 15/50 (30%)
zf-MYND 593..629 CDD:280009 25/35 (71%)
Runx1t1XP_006537631.1 TAFH 145..234 CDD:369407 42/89 (47%)
NHR2 360..426 CDD:370124 18/105 (17%)
NtpE 466..>537 CDD:224308 25/78 (32%)
zf-MYND 538..574 CDD:366792 25/35 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846902
Domainoid 1 1.000 89 1.000 Domainoid score I7820
eggNOG 1 0.900 - - E1_28KWJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 227 1.000 Inparanoid score I3461
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50012
OrthoDB 1 1.010 - - D198762at33208
OrthoFinder 1 1.000 - - FOG0001881
OrthoInspector 1 1.000 - - otm44293
orthoMCL 1 0.900 - - OOG6_103448
Panther 1 1.100 - - O PTHR10379
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1413
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.770

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