DRSC/TRiP Functional Genomics Resources

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Protein Alignment nvy and cbfa2t2

DIOPT Version :10

Sequence 1:NP_001261166.1 Gene:nvy / 37886 FlyBaseID:FBgn0005636 Length:757 Species:Drosophila melanogaster
Sequence 2:NP_001096296.1 Gene:cbfa2t2 / 100124871 XenbaseID:XB-GENE-950034 Length:589 Species:Xenopus tropicalis


Alignment Length:616 Identity:188/616 - (30%)
Similarity:284/616 - (46%) Gaps:157/616 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PDSPPDSSRSLA-PRSPHSPLQLHQHPQRNASVSPVVNGSSSGGGGVGSSGTSPTPTPGSQHAAS 195
            |...|...||:| |.|.||....|..|..|.:.|| ...||:|              |.|..::|
 Frog    41 PPVNPGGPRSVAFPPSSHSNGINHSPPTLNGAPSP-PQRSSNG--------------PSSSSSSS 90

  Fly   196 LAAAAAAAAAAHVEQARLVSKMRKFLGALVQFSQELGQPEVCERVRALVLSLCSGSISVEEFRLA 260
            ||.....|...    .|.:||:::||..|.||..:: .||:.|:||.|||:|.:.::::|||...
 Frog    91 LANQQLPATCG----VRQLSKLKRFLTTLQQFGNDI-SPEIGEKVRTLVLALVNSTVTIEEFHCK 150

  Fly   261 LQEAINLPLRPYVVPLLKNSIALVQREILALARATNQSALQYVTNNEQAVMEFAPHGVASAEFGD 325
            ||||.|.||||:|:|.||.::.|:|||:|..|||..|:..||:..:|..::..:..  :.|:..:
 Frog   151 LQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEHILLNTSTS--SPADSSE 213

  Fly   326 IFIQLEAPTSNGSSAVFKRRSSDSMMEHGGHNGLQEWNEYMASGGAGYPPPPSKRL-TLHPA--H 387
            :.:::     ||:.   ||.|.|...|:|            .......|.||.||: |:.||  |
 Frog   214 LLMEV-----NGNG---KRHSPDRREENG------------CEREPALPEPPVKRVCTISPAPRH 258

  Fly   388 S-------VVAYGEYGVS-------SAEGLPSAAAFMQR-----DERDLRMSEAQARHAAPPQRA 433
            |       |.:...:..:       |.|.:||:..:..:     :.||:|     .||       
 Frog   259 SPALSLPIVNSTSHFHPTPPPLQHYSLEDIPSSQLYRDQLSKIAEHRDIR-----DRH------- 311

  Fly   434 GNPQPNPNAAAPGAPGAGGE--------------------EEWKNIHTMLNCISAMVDKTKRAIT 478
                        .:.|..|.                    ||||::...||||..||:||:|::.
 Frog   312 ------------HSSGVNGNLNNGYQEELVDHRLTEREWAEEWKHLDHALNCIMEMVEKTRRSMA 364

  Fly   479 ILQ-----------------------QRGIE---PQH-PNSGQEVTPAAMAEL--RRQTEEKVAE 514
            :|:                       ::|.|   .|| |.|....|..::.:.  |..|.....|
 Frog   365 VLRRCQEVDRDELNYWKRRFNESNEIRKGSEHLSRQHSPTSTDSGTSDSIRDFGSRTGTGYVTDE 429

  Fly   515 FKRNAEDAVTQVKRQAVIEIQRAVVAAETRAAEIMTQERLRMEKFFMEMSRHSSGERDLDNKSPS 579
            ..|.||:||.:|||||:.|:|:||..||.:|.|::..||.|||:...:..|.::.:..|      
 Frog   430 IWRKAEEAVNEVKRQAMSEVQKAVSEAEQKAFEMIASERARMEQTIADTKRRAAEDAFL------ 488

  Fly   580 MASAQNGSNLQQQCWNCGRKATETCSGCNMARYCSASCQYRDWDSHHQVCG---NTRASELSAKH 641
            :.:.|..|.  :.||||||||:|||||||:||||.:.||::||:.||::||   :|:...|:...
 Frog   489 VVNEQEEST--ESCWNCGRKASETCSGCNIARYCGSFCQHKDWEKHHRICGQGIHTQTKPLTPTR 551

  Fly   642 --LHSASNLSL------RNAMATRSPPTPNS 664
              :..||:..|      |::.||....||.|
 Frog   552 SLIPKASDPVLLSPTLERSSSATSRSSTPAS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nvyNP_001261166.1 TAFH 213..304 CDD:197785 43/90 (48%)
NHR2 <454..>482 CDD:430219 14/50 (28%)
zf-MYND 593..629 CDD:460312 25/35 (71%)
cbfa2t2NP_001096296.1 TAFH 104..193 CDD:462195 42/89 (47%)
NHR2 325..391 CDD:430219 14/65 (22%)
NtpE 426..>482 CDD:441000 25/55 (45%)
zf-MYND 500..536 CDD:460312 25/35 (71%)

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