DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3376 and smpdl3a

DIOPT Version :9

Sequence 1:NP_001246491.1 Gene:CG3376 / 37884 FlyBaseID:FBgn0034997 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001025618.2 Gene:smpdl3a / 595006 XenbaseID:XB-GENE-955002 Length:450 Species:Xenopus tropicalis


Alignment Length:472 Identity:142/472 - (30%)
Similarity:212/472 - (44%) Gaps:82/472 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 PIPMEAAPFFKVLHISDTHYD--PHYAEGSNADCNEPLCCRLSSGRPATPNAAAGKWGDYRKCDT 352
            |...|.|..|  .||||.|.|  .|..|.....|       |||......|  .|.:||: .||:
 Frog    27 PTQEETAGQF--WHISDLHLDFSYHITEDRTKVC-------LSSKGAKASN--PGIFGDF-VCDS 79

  Fly   353 PKRTVDHMLSHIAETHKDIDYILWTGDLPPHDVWNQTKEENLAIIKDTVKQMV----EMFPGVPI 413
            |...:...:.:|.::|:.:|:::||||.|||   ...||.:..|:.|.:..|.    .:.|.:.:
 Frog    80 PYELILSAIQYIKDSHQKVDFMIWTGDSPPH---IPVKELSTKIVIDVIGNMTSTIRSLLPDLLV 141

  Fly   414 FPALGNHESAPVNSFPPPYVNQVDISISWLYDELDIQWRRWLPQSVTHTVRRGAFYSVLVRP--- 475
            |||||||:..|.:..|        :..|.:|..:...|:.||.:....|.|:|.:||.:.:.   
 Frog   142 FPALGNHDYWPQDQLP--------VKESEVYTAVAEFWKPWLTEEALSTFRKGGYYSQIYKSNKS 198

  Fly   476 --GFRIISLNMN--YCNNKNWWLLLNSTDPATELQWFIYELQSAEFSNEKVHVIGHIPPGHSDCL 536
              ..||||||.|  |..||   :.:|.||||.:.:|....|:.:..:||||::|.|:|.|:....
 Frog   199 AHSLRIISLNTNLYYTPNK---VTVNMTDPANQFEWLEDTLKISRQNNEKVYIIAHVPVGYLPFA 260

  Fly   537 KV-------WSRNFYKIISRYESTVTAQFYGHTHYDEFEMFYDPHDLNHPNGIAYIGPSVSPYYD 594
            ::       ::....||...|...:|||||||||.|...:..|  :...|.|..::.|:|:|...
 Frog   261 RLTPAMRETFNERLVKIFRNYSDVITAQFYGHTHRDSIMVLLD--EKEKPVGSVFVTPAVTPIRS 323

  Fly   595 L------NPGYRIYYVDGDHDATTRLVIDHESWIMNLKEANLYGYPIWYKLYTARAAYNMKALRP 653
            .      |||:|:|    .:|.|...::|...:.:||.||||.....|...|.....|.:|.|:|
 Frog   324 ALETDSNNPGFRLY----QYDTTDYHLLDLWHYFLNLTEANLKNESSWNLEYIMTKTYQIKDLQP 384

  Fly   654 SDWNNLLNELTNNQEL-FELYYKYYWKNSPARPTCDAECKKRLICDCRSGRSHDRKHFCAEVESK 717
            .....|:......:.: |..|||.|..:..:|..||..||.:.||..:                .
 Frog   385 ESLEGLVKRFQQPESIEFLYYYKNYLVSFDSRVGCDPLCKLQQICAIQ----------------Y 433

  Fly   718 IDEES-------SKSWK 727
            :||||       ||.:|
 Frog   434 VDEESYTKCIIGSKEFK 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3376NP_001246491.1 SapB 186..258 CDD:214797
Metallophos 299..563 CDD:278574 90/283 (32%)
MPP_ASMase 301..600 CDD:277321 101/324 (31%)
smpdl3aNP_001025618.2 MPP_ASMase 36..335 CDD:277321 102/326 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53732
OrthoDB 1 1.010 - - D1142100at2759
OrthoFinder 1 1.000 - - FOG0000551
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R975
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.960

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