DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3376 and Smpdl3b

DIOPT Version :9

Sequence 1:NP_001246491.1 Gene:CG3376 / 37884 FlyBaseID:FBgn0034997 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001020908.1 Gene:Smpdl3b / 362619 RGDID:1307458 Length:456 Species:Rattus norvegicus


Alignment Length:418 Identity:122/418 - (29%)
Similarity:190/418 - (45%) Gaps:50/418 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 HISDTHYDPHYAEGSNADCNEPLCCRLSSGRPATPNAAAGKWGDYRKCDTPKRTVDHMLSHIAET 367
            ||||.|.||:|...     .:||  |:.....:.|...||.|||| .||:|...::..:..:.|.
  Rat    25 HISDLHLDPNYTVS-----KDPL--RVCPSAGSQPVLNAGPWGDY-LCDSPWALINSSIYAMKEI 81

  Fly   368 HKDIDYILWTGDLPPHDVWNQTKEEN--LAIIKDTVKQMVEMFPGVPIFPALGNHESAPVNSFPP 430
            ....|:|.||||..|| |.|:...|.  |:::......:.|:|||..::.|||||:..|.|..| 
  Rat    82 EPKPDFIFWTGDDTPH-VPNERLGEGAVLSMVDRLTNLIKEVFPGTKVYAALGNHDFHPKNQLP- 144

  Fly   431 PYVNQVDISISWLYDELDIQWRRWLPQSVTHTVRRGAFYS-VLVRPG--FRIISLNMN--YCNNK 490
                   ...:.:|..:...||.||........:.||||| .|..|.  .|::.||.|  |.:|:
  Rat   145 -------AQSNSIYTHVAELWRPWLSNESFTLFKEGAFYSEKLPSPSKTGRVVVLNTNLYYSSNE 202

  Fly   491 NWWLLLNSTDPATELQWFIYELQSAEFSNEKVHVIGHIPPGHSDCL--KVWSR-----NFYKIIS 548
            .   .....||..:.||....|.:|..:.|.|::|||:|||..:..  |.|.|     .:.|::.
  Rat   203 Q---TAGMADPGQQFQWLGDVLSNASRNGEMVYIIGHVPPGFFEKTQDKAWFRESFNEEYLKVVQ 264

  Fly   549 RYESTVTAQFYGHTHYDEFEMFYDPHDLNHPNGIAYIGPSVSPYYDLNPGYRIYYVDG------- 606
            ::...:..||:||.|.|.|.|||.  ....|..:.::.|.|:|:....||    .|||       
  Rat   265 QHHRVIAGQFFGHHHTDSFRMFYS--STGAPISVMFLTPGVTPWKTTLPG----VVDGANNPAIR 323

  Fly   607 --DHDATTRLVIDHESWIMNLKEANLYGYPIWYKLYTARAAYNMKALRPSDWNNLLNELTNNQEL 669
              ::|..|..:.|..::.:||::|:....|.|.:.|....||.::....|.....|..:.:.|.:
  Rat   324 IFEYDRATLNLKDMVTYYLNLRQADTQETPQWEQEYRLTEAYEVQDASTSSMYTALTRIASEQHI 388

  Fly   670 FELYYKYYWKNSPARPTCDAECKKRLIC 697
            .:.||.|...:...:| |:..|::..:|
  Rat   389 LQRYYVYNSVSYSHQP-CEDVCRREHVC 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3376NP_001246491.1 SapB 186..258 CDD:214797
Metallophos 299..563 CDD:278574 86/273 (32%)
MPP_ASMase 301..600 CDD:277321 98/310 (32%)
Smpdl3bNP_001020908.1 Metallophos 22..281 CDD:278574 87/275 (32%)
MPP_ASMase 23..323 CDD:277321 101/323 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3770
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53732
OrthoDB 1 1.010 - - D369165at33208
OrthoFinder 1 1.000 - - FOG0000551
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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