DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3376 and Smpd1

DIOPT Version :10

Sequence 1:NP_001246491.1 Gene:CG3376 / 37884 FlyBaseID:FBgn0034997 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001006998.1 Gene:Smpd1 / 308909 RGDID:1549719 Length:627 Species:Rattus norvegicus


Alignment Length:578 Identity:238/578 - (41%)
Similarity:346/578 - (59%) Gaps:28/578 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 SRMLWYDVAGGDGLVYP-PFVDKALKLLNLKQVAFEIENSV-MSKVTCTACRAGAGMLQHQIQSG 204
            |.:||....     .|| |....::|   ...||.:::|:. ...:||.||:.....|.:.::..
  Rat    48 STVLWVPAR-----AYPLPSQGHSVK---FSAVAPQLQNAFGWRNLTCPACKVLFTALNYGLKKE 104

  Fly   205 KTDAELIRMITDYCTNLNIQSARVCQGVAQLFGSELIYVLKRVNLSPDELCSFVIGDGCA--DVY 267
            ...|.:..:....|..|||....|||....||..:::.|..|..|||.|.|..::|..|.  |::
  Rat   105 PNVARVGSVAIKMCKMLNIAPLNVCQSAVHLFEDDVVDVWTRSVLSPSEACGLLLGSSCGHWDIF 169

  Fly   268 NPYHEWEVIFPPVPKPPRLPDLPIPMEAAPFFKVLHISDTHYDPHYAEGSNADCNEPLCCRLSSG 332
            :   .|.:..|.|||||..|..| |...||..:||.::|.|:|..|.||::.:|.:|||||..||
  Rat   170 S---TWNISLPSVPKPPPKPPSP-PAPGAPVSRVLFLTDLHWDHDYLEGTDPNCADPLCCRRGSG 230

  Fly   333 RPATPNAAAGKWGDYRKCDTPKRTVDHMLSHIAETHKDIDYILWTGDLPPHDVWNQTKEENLAII 397
            .|......||.||:|.|||.|.||::.:|..:... ...:.:.||||:|.||||.|::::.|..:
  Rat   231 WPPNSRTGAGYWGEYSKCDLPLRTLESLLKGLGPA-GPFEMVYWTGDIPAHDVWQQSRQDQLRAL 294

  Fly   398 KDTVKQMVEMFPG-VPIFPALGNHESAPVNSFPPPYV--NQVDISISWLYDELDIQWRRWLPQSV 459
             :|:..:|..|.| ||::||:|||||.|||.||||::  ||   |..|||:.:...|..|||...
  Rat   295 -NTITDLVWKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQ---SSQWLYEAMAKAWEPWLPADA 355

  Fly   460 THTVRRGAFYSVLVRPGFRIISLNMNYCNNKNWWLLLNSTDPATELQWFIYELQSAEFSNEKVHV 524
            .||:|.|.||::..|||.|:||||||:|:.:|:|||:||||||.:|||.:.|||:||...:|||:
  Rat   356 LHTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVDELQAAENRGDKVHI 420

  Fly   525 IGHIPPGHSDCLKVWSRNFYKIISRYESTVTAQFYGHTHYDEFEMFYDPHDLNHPNGIAYIGPSV 589
            ||||||||  |||.||.|:||||:|||:|:..||:||||.||||:|||...|:.|..:|::|||.
  Rat   421 IGHIPPGH--CLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLGPSA 483

  Fly   590 SPYYDLNPGYRIYYVDGDHDATTRLVIDHESWIMNLKEANL-YGYPIWYKLYTARAAYNMKALRP 653
            :.:.:||||||:|.:||::..::.:|:|||::|:||.:||. .|.|.|.:||.||..|.:....|
  Rat   484 TTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAPGGTPSWKRLYRARETYGLPDAMP 548

  Fly   654 SDWNNLLNELTNNQELFELYYKYYWKNSPARPTCDAECKKRLICDCRSGRSHDRKHFC 711
            :.|:||:..:..:::||:.::..|.|..|....|...|:...:|...|.|: |....|
  Rat   549 ASWHNLVYRMRADEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARA-DSPALC 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3376NP_001246491.1 SapB 186..258 CDD:214797 22/71 (31%)
MPP_ASMase 301..600 CDD:277321 153/301 (51%)
ASMase_C 584..697 CDD:466022 40/113 (35%)
Smpd1NP_001006998.1 SapB 85..158 CDD:214797 22/72 (31%)
MPP_ASMase 199..494 CDD:277321 153/301 (51%)
ASMase_C 472..593 CDD:466022 42/120 (35%)

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