DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3376 and asm-2

DIOPT Version :9

Sequence 1:NP_001246491.1 Gene:CG3376 / 37884 FlyBaseID:FBgn0034997 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_509894.2 Gene:asm-2 / 181323 WormBaseID:WBGene00000212 Length:618 Species:Caenorhabditis elegans


Alignment Length:597 Identity:216/597 - (36%)
Similarity:313/597 - (52%) Gaps:51/597 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 WYDVAGGDGLVYPPFVDKALKLLNLKQVAFEIENSVMSKVTCTACRAGAGMLQHQIQSGKTDAEL 210
            |.:..|.:..|.||   |...|...|:...|.||..||.:.||....|   :|..|....||.|:
 Worm    37 WTNARGNEAAVPPP---KYKMLRYAKKAINEPENRKMSCLFCTFAVDG---VQALIAQNSTDNEI 95

  Fly   211 IRMITDYCTNLNIQSARVCQGVAQLFGSELIYVLKRVNLSPDELC-SFVIGDGCADVYNPY-HEW 273
            ...:.:.|...:::...||:.:...|..|:::||:|...:|:|:| :|:...|.:|  .|. |.|
 Worm    96 AAFLVNLCDLFDVEQPHVCKNIIYAFKDEVVFVLERSVFTPEEICGAFIANCGHSD--KPLTHMW 158

  Fly   274 EVIFP---PVPKP-PRLPDLPIPMEAAPFFKVLHISDTHYDPHYAEGSNADC-------NEPLCC 327
            .:..|   |..|| |::||      ..|.|||||:||.|.|..|..|:.|.|       ...:||
 Worm   159 NITIPGGKPPIKPWPKIPD------NKPTFKVLHLSDIHIDHQYVVGTEAYCQLDSALGTYAMCC 217

  Fly   328 R----LSSGRPATPN-----AAAGKWGDYRKCDTPKRTVDHMLSHIAETHKDIDYILWTGDLPPH 383
            |    .|.|.|....     ..||.||....||.|.:|.:..:.||::|.||:|||:.|||...|
 Worm   218 RDYSQDSQGAPTNLKDKPIYVPAGPWGMPYLCDLPYQTFESAMKHISKTFKDLDYIIITGDFEAH 282

  Fly   384 DVWNQTKEENLAIIKDTVKQMVEMFPGVPIFPALGNHESAPVNSFPPPYVNQVDI-SISWLYDEL 447
            |.|:.|::.....:.:.....:|.|||||::.::||||..|.::..|..:.:.|. ...|||..:
 Worm   283 DSWDYTEDLTRENMNNMTNVFLEYFPGVPVYVSIGNHEGVPQDAMAPHTMPEYDTRGPQWLYKIM 347

  Fly   448 DIQWRRWLPQSVTHTVRRGAFYSVLVRPGFRIISLNMNYCNNKNWWLLLNSTDPATELQWFIYEL 512
            ...|..|:||....||:..|.|:|..:||.::||||..||:..|::|.:|..||...|:|.|.||
 Worm   348 SEMWSHWIPQEALDTVQYRASYAVYPKPGLKLISLNTIYCSEFNFYLYVNEVDPDATLEWLIEEL 412

  Fly   513 QSAEFSNEKVHVIGHIPPGHSDCLKVWSRNFYKIISRYESTVTAQFYGHTHYDEFEMFYDPHDLN 577
            |.:|...|.||:|.|||||.:.|||.||.||::|:.|||:|:...||||||||:|.::||..|.|
 Worm   413 QDSENKGELVHIISHIPPGDNYCLKGWSWNFFEIVKRYENTIAQMFYGHTHYDQFMVYYDMDDPN 477

  Fly   578 -HPNGIAYIGPSVSPYYDLNPGYRIYYVDGDHDATTRLVIDHESWIMNLKEANLYG-YPIWYKLY 640
             .|....:|.||::.|..|||.||||.:||.::..|..|.|.:::..|:.|||:.. .|.|...|
 Worm   478 RRPFHFNWISPSLTTYDWLNPAYRIYEIDGGYEGATYTVKDAKTYFANVTEANMKNKEPEWVLSY 542

  Fly   641 TARAAYNMKALRPSDWNNLLNELTNNQELF----ELYYKYYWKNSPARPTC--DAECKKRLICDC 699
            ..|..|.|....|..|::|.::|..|..||    .|||:.::.|.     |  |.:|:...:||.
 Worm   543 DTREHYQMADFSPQSWSDLSDKLWTNTTLFRDYVRLYYRNHYNNE-----CYTDYKCRYTFVCDI 602

  Fly   700 RSGRSHDRKHFC 711
            :.|||:| :.||
 Worm   603 KKGRSYD-ESFC 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3376NP_001246491.1 SapB 186..258 CDD:214797 19/72 (26%)
Metallophos 299..563 CDD:278574 112/280 (40%)
MPP_ASMase 301..600 CDD:277321 127/316 (40%)
asm-2NP_509894.2 SapB 70..143 CDD:214797 21/75 (28%)
SapB_1 72..106 CDD:282970 9/36 (25%)
MPP_ASMase 184..501 CDD:277321 127/316 (40%)
CpdA 251..555 CDD:224327 123/303 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160974
Domainoid 1 1.000 234 1.000 Domainoid score I1340
eggNOG 1 0.900 - - E1_KOG3770
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H457
Inparanoid 1 1.050 379 1.000 Inparanoid score I1200
Isobase 1 0.950 - 0.543564 Normalized mean entropy S3573
OMA 1 1.010 - - QHG53732
OrthoDB 1 1.010 - - D1142100at2759
OrthoFinder 1 1.000 - - FOG0000551
OrthoInspector 1 1.000 - - otm14174
orthoMCL 1 0.900 - - OOG6_101180
Panther 1 1.100 - - LDO PTHR10340
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R975
SonicParanoid 1 1.000 - - X1866
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

Return to query results.
Submit another query.