DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13575 and Tacr3

DIOPT Version :9

Sequence 1:NP_611903.1 Gene:CG13575 / 37883 FlyBaseID:FBgn0034996 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_058749.1 Gene:Tacr3 / 24808 RGDID:3810 Length:452 Species:Rattus norvegicus


Alignment Length:542 Identity:108/542 - (19%)
Similarity:198/542 - (36%) Gaps:171/542 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EWAFAQHG---EATPIPSIQPYPGVFVGDLSQLNRFKRHA-----FSAVVGTLFVLAFCGNLSTL 72
            ||...|.|   .|..:|:....|.....:|:  |:|.:.:     :|...|.:..:|..|||..:
  Rat    32 EWLALQAGNFSSALGLPATTQAPSQVRANLT--NQFVQPSWRIALWSLAYGLVVAVAVFGNLIVI 94

  Fly    73 Y-VNSRRKLRPFFRACLISLACSDLVSSIFCT-VSYMAQFQAQYLQLWTIGGFMCKFVPFITTTS 135
            : :.:.:::|......|::||.||...:.|.| ::::....::    |..|...|:|..|...|:
  Rat    95 WIILAHKRMRTVTNYFLVNLAFSDASVAAFNTLINFIYGLHSE----WYFGANYCRFQNFFPITA 155

  Fly   136 VLSGSLTLVAIALDRYLAVMRPVLGFWSPDKRFSTLSMLLIWACSIGSSGPLLGIYDYRKIYLLD 200
            |.:...::.|||:|||:|::.|:      ..|.|..:..::    |||            |::| 
  Rat   156 VFASIYSMTAIAVDRYMAIIDPL------KPRLSATATKIV----IGS------------IWIL- 197

  Fly   201 VEDSSEESEEVVTAVPEELVVTELEMV---HMCLA----GDHDVGLYYVILFTLIF-LPCIVSFL 257
                     ..:.|.| :.:.::::::   .:|..    |......|::|:..|:: .|.::..:
  Rat   198 ---------AFLLAFP-QCLYSKIKVMPGRTLCYVQWPEGPKQHFTYHIIVIILVYCFPLLIMGV 252

  Fly   258 WLNAVIARQLWLRRHYHQEQQEQHQEPKEGQFKTMANGGDLLMPSTLVSAMGVAVPFALDNTPLP 322
             ...::...||                          ||::                        
  Rat   253 -TYTIVGITLW--------------------------GGEI------------------------ 266

  Fly   323 PKSTVNAPGKKTTAAALAREARHRKMVVVVLLMMAVFICLRLPAWVFLIMRLYGSYSEPIDW--- 384
            |..|.:...::..|        .||:|.::::::..|....||..|:.|  |...|.:...|   
  Rat   267 PGDTCDKYHEQLKA--------KRKVVKMMIIVVVTFAICWLPYHVYFI--LTAIYQQLNRWKYI 321

  Fly   385 -LLYFSFGILNLFSCALNPIFYTFLTQTIRTLTLVKHKIQGFLGCPPGKVPDGMPTDQMDKSGCC 448
             .:|.:...|.:.|...|||.|..|.:..|    ...| :.|..||..:|..   .|:::..   
  Rat   322 QQVYLASFWLAMSSTMYNPIIYCCLNKRFR----AGFK-RAFRWCPFIQVSS---YDELELK--- 375

  Fly   449 CGLRPPTFTWRCHPSRDRA--------AATVIRDVDQPDPPSDQ-----VQPDPSSLRRFLSYKQ 500
                    |.|.||:|..:        :.||:.|.:..||....     |..|||:         
  Rat   376 --------TTRFHPTRQSSLYTVSRMESVTVLFDPNDGDPTKSSRKKRAVPRDPSA--------- 423

  Fly   501 EVFTIYKQCG--DSSSASIESS 520
                  ..|.  .|.|||..||
  Rat   424 ------NGCSHRGSKSASTTSS 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13575NP_611903.1 7tm_1 67..>188 CDD:278431 31/122 (25%)
Tacr3NP_058749.1 7tm_4 81..>204 CDD:304433 35/158 (22%)
7tm_1 89..343 CDD:278431 65/351 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..452 14/55 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.