DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13575 and tacr1

DIOPT Version :9

Sequence 1:NP_611903.1 Gene:CG13575 / 37883 FlyBaseID:FBgn0034996 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001106489.1 Gene:tacr1 / 100127678 XenbaseID:XB-GENE-5835469 Length:407 Species:Xenopus tropicalis


Alignment Length:397 Identity:83/397 - (20%)
Similarity:140/397 - (35%) Gaps:130/397 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AFSAVVGTLFVLAFCGNLSTLY-VNSRRKLRPFFRACLISLACSDLVSSIFCTVSYMAQFQAQYL 115
            |:|.:|    :::..||:..:: :.:.:::|......|::||.::...|.|.||   ..|.....
 Frog    38 AYSIIV----IVSVVGNIIVMWIILAHKRMRTVTNYFLVNLAFAEASMSAFNTV---INFTYAIH 95

  Fly   116 QLWTIGGFMCKFVPFITTTSVLSGSLTLVAIALDRYLAVMRPVLGFWSPDKRFST----LSMLLI 176
            ..|..|...|||..|...::|.|...::.|||||||:|::.|:      ..|.|.    :.:.:|
 Frog    96 NHWYYGLIYCKFHNFFPISAVFSSIYSMTAIALDRYMAIIHPL------KPRLSATATRIVIAVI 154

  Fly   177 WACSIGSSGPLLGIYDYRKIYLLDVEDSSE---------ESEEVVTAVPEELVVTELEMVHMCLA 232
            |..:...:.|        :.|...||.:.:         |||.           .:.|.|     
 Frog   155 WGFAFALAFP--------QGYFATVEPTPDRVVCYMEWPESEN-----------RKFEKV----- 195

  Fly   233 GDHDVGLYYVILFTLI-FLPCIV---SFLWLNAVIARQLWLRRHYHQEQQEQHQEPKEGQFKTMA 293
                   |.|:||.|| |||.:|   |:.:    |...||............|::          
 Frog   196 -------YQVLLFGLIYFLPLLVIGCSYTF----IGMTLWASEIPGDSSDRYHEQ---------- 239

  Fly   294 NGGDLLMPSTLVSAMGVAVPFALDNTPLPPKSTVNAPGKKTTAAALAREARHRKMVVVVLLMMAV 358
                                                        .:|:    ||:|.::::::..
 Frog   240 --------------------------------------------VVAK----RKVVKMMIVVVCT 256

  Fly   359 FICLRLPAWVFLIMRLY-GSYSEPIDWLLYFSFGILNLFSCALNPIFYTFLTQTIRTLTLVKHKI 422
            |....||..::.:::|: ...|:.....||.....|.:.|...|||.|..|....|  ...||. 
 Frog   257 FAICWLPYHIYFLLQLFLPDESQKFYQQLYLGIMWLGMSSTMYNPIIYCCLNDRFR--IGFKHV- 318

  Fly   423 QGFLGCP 429
              |..||
 Frog   319 --FRWCP 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13575NP_611903.1 7tm_1 67..>188 CDD:278431 33/125 (26%)
tacr1NP_001106489.1 7tmA_NK1R 33..315 CDD:320668 78/384 (20%)
TM helix 1 34..60 CDD:320668 5/25 (20%)
TM helix 2 67..93 CDD:320668 8/28 (29%)
TM helix 3 105..135 CDD:320668 14/29 (48%)
TM helix 4 146..167 CDD:320668 3/28 (11%)
TM helix 5 193..222 CDD:320668 14/44 (32%)
TM helix 6 241..271 CDD:320668 7/33 (21%)
TM helix 7 283..308 CDD:320668 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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