DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nord and Ndnf

DIOPT Version :9

Sequence 1:NP_611900.1 Gene:nord / 37882 FlyBaseID:FBgn0050418 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_765987.2 Gene:Ndnf / 68169 MGIID:1915419 Length:568 Species:Mus musculus


Alignment Length:618 Identity:133/618 - (21%)
Similarity:224/618 - (36%) Gaps:173/618 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QKCPSL--QRYRKMLKDFDDLED-------------LYVDVPVHIALAERQRKRFVLNLNDSTPL 114
            ||.|:.  :.::..::|.:...|             |:.|.|         |:.|.:...|:|||
Mouse    20 QKLPTRDEELFQMQIRDKEFFHDSSVIPDGAEVSSYLFRDTP---------RRYFFMVEEDNTPL 75

  Fly   115 TIRFS---APVGRKMYYNQ---------TGNP------------LRPAAVAPGPGVAVGSLVLPC 155
            ::..:   ||:..|:...:         :|:|            :....:....|..|...:...
Mouse    76 SVTVTPCDAPLEWKLSLQELHEGSSADGSGDPELLDQQKQQMTDVEGTELFSYKGNDVEYFLSSS 140

  Fly   156 ALRGQYDLFVLARHSGA-LKVDALAEHPQHD--WPLLNATHRIAIRTQNRVRKREMIVKWERS-- 215
            :..|.|.|.:|:..... .||.|... |:.|  :|.|....|:.:.:..|.   .:.:.|:.|  
Mouse   141 SPSGLYQLELLSTEKDTHFKVYATTT-PESDQPYPELPYDPRVDVTSFGRT---TVTLAWKPSPT 201

  Fly   216 -KFDFHVMHYCLVIQRLSMDTPRMIFTNFCQA-VSAYTDQQPMTPSCAAGGPLEGI--------- 269
             ......:.||:||.:      ...|.:.|.| .....|...|.      .|..|:         
Mouse   202 ASILKQPIEYCVVINK------EHNFKSLCAAETKMNADDAFMV------APKPGLDFNPFDFAH 254

  Fly   270 WGAPPQ---RERRL--------------NPRQNVHIVCTGKRRQQLLRRLLPRSSYHLDLFGIHQ 317
            :|.|..   ::|.|              .|:.::..:|.|.:....:..|.|.:.|:.|:|.:  
Mouse   255 FGFPTDNLGKDRSLLAKPSPKVGRHVYWRPKVDIQKICIGNKNIFTVSDLKPDTQYYFDVFMV-- 317

  Fly   318 GRQNLTLRLASSQVN-FNRTQPLALKQQALMQLKIG-------GQHGKQVYSFKVPQTTRQLGEP 374
               |....::::.|. |.||:..|  :|..::||.|       .:.||:...| .|.::.| ...
Mouse   318 ---NTNTNMSTAYVGAFVRTKEEA--KQKTVELKDGRVTDVFVKRKGKKFLRF-APVSSHQ-KVT 375

  Fly   375 FMRHLLIPCSGSEIR----------VKLLRQRSEVGKTEAFYSPTYIRQKGVLPGERYLMRFEPS 429
            |..|..:.....::|          |:.:||....||.:..|   .||.||...|          
Mouse   376 FFIHSCMDAVQVQVRRDGRLLLSQNVEGIRQFQLRGKPKGKY---LIRLKGNRKG---------- 427

  Fly   430 NDDEALRAQKVMVALSSEALFRDLPELPQNTTV--FNVRTRCSRATIAWNGSPDERELSYCIIVF 492
                   |.|:.:..::.......|.||::|.:  |:....||..|:||.|:.:.|:  :||.  
Mouse   428 -------ASKLKILATTRPSKHAFPSLPEDTRIKAFDKLRTCSSVTVAWLGTQERRK--FCIY-- 481

  Fly   493 NLPQRNRSVVDFTNYCMDFVPKRVMQYRYF--------EWMTCR--ERQQSPDNIETETILNLMP 547
                  |..|| .||..|  .||..|.:..        |.:.|:  ..|.....:.||||.:|.|
Mouse   482 ------RKEVD-GNYSED--QKRREQNQCLGPDTRKKSEKVLCKYFHSQNLQKAVTTETIRDLQP 537

  Fly   548 GSSYL--VYVTANLSMGKPLPYQALTLHMASQC 578
            |.|||  |||..:  .|..:.||:..:.....|
Mouse   538 GKSYLLDVYVVGH--GGHSVKYQSKIVKTRKVC 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nordNP_611900.1 DUF2369 286..578 CDD:287188 80/323 (25%)
NdnfNP_765987.2 DUF2369 291..381 CDD:370860 24/98 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837992
Domainoid 1 1.000 43 1.000 Domainoid score I12302
eggNOG 1 0.900 - - E1_KOG4806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I5471
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004105
OrthoInspector 1 1.000 - - oto92863
orthoMCL 1 0.900 - - OOG6_109866
Panther 1 1.100 - - O PTHR14619
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4268
SonicParanoid 1 1.000 - - X5574
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.780

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