DRSC/TRiP Functional Genomics Resources

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Protein Alignment nord and ndnf

DIOPT Version :10

Sequence 1:NP_611900.1 Gene:nord / 37882 FlyBaseID:FBgn0050418 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001410712.1 Gene:ndnf / 561437 ZFINID:ZDB-GENE-030131-207 Length:574 Species:Danio rerio


Alignment Length:630 Identity:127/630 - (20%)
Similarity:224/630 - (35%) Gaps:191/630 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QKCPSLQR--YRKMLKDFDDLED-------------LYVDVPVHIALAERQRKRFVLNLNDSTPL 114
            ||.|:...  ::..::|.....|             |:.|.|        :|..||:. .|:|||
Zfish    20 QKLPTRDEGLFQMQIRDKAQFHDSSVMPDGAEISGYLFRDTP--------KRYYFVVE-EDNTPL 75

  Fly   115 TIRFS---APVGRKMYYNQ---------TGNP----LRPAAVAPGPGVA--------VGSLVLPC 155
            .:..:   ||:..::...:         :|.|    .:...|....|..        |.|.:...
Zfish    76 LVTVTPCDAPLEWRLTLQELPEDRSGEGSGEPEPLEQQKQQVTANEGTELFTYKGNDVESFISSS 140

  Fly   156 ALRGQYDLFVLARHSGA-LKVDALAEHPQHD--WPLLNATHRIAIRTQNRVRKREMIVKWERSKF 217
            :..|.|.|.:::....: .|:.:... |:.|  :|.|....|:.:....|.   .:.:.|:.:..
Zfish   141 SPSGLYQLEIISTEKDSNFKIYSTTT-PESDQPYPELPYDPRVDVTALGRT---TVTLAWKPTPT 201

  Fly   218 DFHVM----HYCLVIQ-------------RLSMDTPRMI--------------FTNFCQAVSAYT 251
            . .||    .||:||.             ::|:|...||              :..|..:.:.:.
Zfish   202 G-SVMGQPIQYCVVINKEHNFKSLCAAEAKMSLDDAFMIAPKPGRDFSPFDFAYFGFVPSENDFH 265

  Fly   252 DQQPMTPSCAAGGPLEGIWGAPPQRERRLNPRQNVHIVCTGKRRQQLLRRLLPRSSYHLDLFGIH 316
            ..:.:|.:.|....:...:...|:       ..::..:|.|.:....:..|.|.:.|:.|:|.::
Zfish   266 KDRFLTTNRALSNKMSRAYIPKPK-------VADIQKICIGNKNIFTITDLKPDTQYYFDVFAVN 323

  Fly   317 QGRQNLTLRLASSQVNFNRTQPLALKQQALMQLKIGGQHGKQVYSFKVPQT-TRQLGEPFMRHLL 380
            .|....|..:.:    |.||:..|  :|..::||.|          ||... .::.|..|:|  .
Zfish   324 TGTNMSTAYVGT----FARTKEEA--KQKTVELKDG----------KVTDVFVKRKGSKFLR--F 370

  Fly   381 IPCSGSE------------IRVKLLRQRSEVGKTEAFYSPTYIRQ---KGVLPGERYLMRFEPSN 430
            .|.|..:            ::|::.|.    ||.....:...:||   :| .|..:||:|...|.
Zfish   371 APVSSHQRVTLFVHACLDAVQVQVRRD----GKLVLSQNVEGVRQFQLRG-KPKAKYLIRLRGSR 430

  Fly   431 DDEALRAQKVMVALSSEALFRD-LPELPQNTTV--FNVRTRCSRATIAWNGSPDERELSYCIIVF 492
            ..    |..:.|..|:.|..:. .|.||::|.:  |:....||..|:||.|:             
Zfish   431 KG----ASTLKVLASTRAGGKQPFPALPEDTRIKAFDKLRTCSSVTVAWLGT------------- 478

  Fly   493 NLPQRNRSVVDFTNYCMDFVPKRVMQYRYFEWMTCRERQQ--SPDN------------------- 536
              .:||:       ||   |.:|.:...|.|....||:.|  .|::                   
Zfish   479 --QERNK-------YC---VYRREVSESYGEEHRRREQNQCSGPESRRKSEKVLCKYFYSANLQK 531

  Fly   537 -IETETILNLMPGSSYL--VYVTANLSMGKPLPYQALTLHMASQC 578
             :.||||..|..|.|||  |||..:  .|..:.||:..:.....|
Zfish   532 AVTTETITGLEAGKSYLLDVYVVGH--SGHSVKYQSKLVKTRKYC 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nordNP_611900.1 NDNF 208..333 CDD:462981 24/155 (15%)
NDNF_C 418..568 CDD:466079 45/176 (26%)
ndnfNP_001410712.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..118 2/20 (10%)
NDNF 192..340 CDD:462981 26/159 (16%)
NDNF_C 399..574 CDD:466079 51/206 (25%)

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