DRSC/TRiP Functional Genomics Resources

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Protein Alignment nord and ndnf-1

DIOPT Version :9

Sequence 1:NP_611900.1 Gene:nord / 37882 FlyBaseID:FBgn0050418 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_500282.2 Gene:ndnf-1 / 177083 WormBaseID:WBGene00021893 Length:536 Species:Caenorhabditis elegans


Alignment Length:644 Identity:131/644 - (20%)
Similarity:232/644 - (36%) Gaps:185/644 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLFL--LSTSLHAEISHLPMASNRIILDSTELLQNPLIQDAGVPAAR---------ATPLPPQ 65
            |||||.  |.|..|.    :|| |..|:.::||    .:|..||..:.:         |:|....
 Worm     5 LLLLFTIQLCTPFHV----VPM-SYSILSENTE----SVIDLAGKVSEKRFYLHITNEASPFFMY 60

  Fly    66 KCP----------SLQRYRKMLKDFDDLEDLYVDVPVHIALAERQRKRFVLNLNDSTPLTIRFSA 120
            ..|          ::.:...|.::||.:.|:      ..:|.|.::.:.:...:|...:|. |:.
 Worm    61 VTPCGAAVHWQLFTMDKDISMSEEFDTISDM------SNSLEESEKFKLIAGEDDKKRMTF-FAH 118

  Fly   121 PVGRKMYYNQTGNPLRPAAVAPGPGVAVGSLVLPCALRGQYDLFVLARHSGALKVDALAEHP--Q 183
            .:.:|:..     .:|.|:.:   ..:|.....|...|.:                  .::|  .
 Worm   119 SLPKKVIL-----VVRAASTS---SASVRIFFTPSLFRLE------------------DQYPPLP 157

  Fly   184 HDWPLLNATHRIAIRTQNRVRKREMIVKW---------ERSKFDFHVMHYCLVIQRLSMDTPRMI 239
            ||..|  ||:.|:..|.:|..:...::.|         |..::     ..|.::.|...:     
 Worm   158 HDTRL--ATNIISESTYSRRDEVSTLITWKISPQVRNAEPGRY-----RICTIVSRRDPE----- 210

  Fly   240 FTNFCQAVSAYTDQQPMTPSCAAGGPLEGIWGAPPQRERRLNPRQNVHIVCTGKRRQQLLRRLLP 304
            |...|.    :.::...|..|.                    |:.|..:|....||.:       
 Worm   211 FAGMCD----HVEEGVETVKCV--------------------PQTNNTVVIGSLRRDR------- 244

  Fly   305 RSSYHLDLF------GIHQGRQNLTLRLASSQV---------NFNRTQ----PLALKQQALMQLK 350
              :|.:.:|      |.....:..|::  :|:|         |..|.|    |..|....|.|::
 Worm   245 --TYFVTVFVRDHKRGTSSAYEVQTIQ--TSEVVTHRRKVTRNVPRKQKKSAPRVLSNGQLEQVE 305

  Fly   351 IGGQHGKQV----YSFKVPQTTRQLGEPFMRHLLIPCSGSEIRVKLLRQRSEVGKTEAF-----Y 406
            :..:.|..|    :...:|:......:..|  |::......:|:.|.|....:.:::||     :
 Worm   306 LEPKKGTFVNLKFFVNSLPEGAENNTQSAM--LIVHACDGLVRINLFRNGKILKRSDAFSGFRRF 368

  Fly   407 SPTYIRQKGVLPGERYLMRFEPSNDDEALRAQKVMVALSSEALFRDLPELPQNTTVFNVRTRCSR 471
            ..|.||.     |.   :||:..||||.  .:.:.|..|::......|.||.:|:|..|...||.
 Worm   369 VVTNIRS-----GH---LRFQIVNDDET--PKTIRVWASTDLTTSPYPNLPDDTSVKIVGRSCSS 423

  Fly   472 ATIAWNGSPDERELSYCIIVFNLPQRNRSVVDF--------TNYCMDFVPKRVMQYRYFEWMTCR 528
            |:|.|..:.|. .:.||:      .|.|...:|        .|.|...:...|:...|....|..
 Worm   424 ASIQWIRAHDS-HVKYCV------YRRREHSNFLEHLVSLADNLCEGGLSSSVLVGCYTHSPTSS 481

  Fly   529 ERQQSPDNIETETILNLMPGSSYLVYVTANLSMGKP----LPYQALTLHMASQCLDGSH 583
            | ..:...||| ||..|:|.|:|.:.:.|. .:.:|    ||::.:.:.....|  |.|
 Worm   482 E-DDAQSLIET-TIGGLLPASTYRLDLLAT-PLDRPNAQALPFRTVWVRTNRFC--GVH 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nordNP_611900.1 DUF2369 286..578 CDD:287188 74/331 (22%)
ndnf-1NP_500282.2 DUF2369 223..532 CDD:287188 78/361 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159860
Domainoid 1 1.000 41 1.000 Domainoid score I8547
eggNOG 1 0.900 - - E1_KOG4806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D152874at33208
OrthoFinder 1 1.000 - - FOG0004105
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_109866
Panther 1 1.100 - - LDO PTHR14619
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4268
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.740

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