DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir60a and Ir75b

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:598 Identity:108/598 - (18%)
Similarity:205/598 - (34%) Gaps:174/598 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 LFHNATCRNRPLGVASNIFKD----LMEM-----FYVHRVALLYANSTMNYNLL----------- 220
            |.||..    .|||..:|..|    :::|     |:.||...|..:.:||:::|           
  Fly    58 LNHNIL----KLGVFLDINCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNFSVLESHFKEAQIFV 118

  Fly   221 -------VNDYYSNVNCRILNVQSVGQCHDGKL----------YPNNAVVKASMQDYVSGFSPRN 268
                   .:|.:|. |..:.:|.:.|:...|:|          ...|..|:..:.:..:..:.::
  Fly   119 DADVTYVTHDPFSK-NFLLYDVYNKGRQLGGELNITADREIFCNKTNCRVERYLSELYTRSALQH 182

  Fly   269 CTFFACSSISAPFVEADCILGLEMR-ILGFM--KNRLKFDVNQTCSLESRGEM------------ 318
            ...|...::.|..|.....|.:.:: |..||  |.|::.|.......::|..:            
  Fly   183 RKSFTGLTMRATAVVTALPLNVSIKEIFDFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIF 247

  Fly   319 -----DGPANWTGLLGKVQNNECDFVFGGYYPDNEVADHFWGSD--TYLQDAHTWYI--KMADRR 374
                 ||.|. .|::|.:..::.|..         :|...:..|  .:||....:.:  ::...|
  Fly   248 RDRWSDGNAT-GGMIGDLILDKADLA---------IAPFIYSFDRALFLQPITKFSVFREICMFR 302

  Fly   375 PAWQALVGI--------FEAYTWIGFILILIIS-WLFWFTLVMILPEPKYYQQLSLTA------- 423
            .......|:        |....|:.|.|:|::: .|.|.|  .||...|.::...||:       
  Fly   303 NPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVT--FILERRKQWKPSLLTSCLLSFGA 365

  Fly   424 --INALAVTISIAVQERPICETTRLFFMALTLYGLNVVATYTSKMIATFQDPGYLHQLDELTEVV 486
              |....:|        |.....|:.|.||.:....:...|||.:::..........:..|.::.
  Fly   366 GCIQGAWLT--------PRSMGGRMAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLA 422

  Fly   487 AAGIPFG--------------GHEESRDWF--------ENDDDMWI-----------------FN 512
            .:.:..|              ...:.||.:        .:.|.:||                 ..
  Fly   423 DSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVYIT 487

  Fly   513 GYNISPEFIPQSKNLEAVKWGQRCILSNRMYTMQSPLADVIYAFPNNVFSSPVQMIMKAGFPFLF 577
            |.....||:  .|:..|   .|.|.|:      :.||.|..:........||...::|     |.
  Fly   488 GVATGYEFV--RKHFLA---HQICELN------EIPLRDASHTHTVLAKRSPYAELIK-----LS 536

  Fly   578 EMNSIIRLMRDVGIFQKIDADFRYNNTYLNRINKMRPQFPETAIVLTTEHLKGPFFILVVGSCWA 642
            |:.     |.:.|:      .|::..:::.  .|:........:.:..|: ..|.||:::|:...
  Fly   537 ELR-----MLETGV------HFKHERSWME--TKLHCYQHNHTVAVGLEY-AAPLFIILLGAIIL 587

  Fly   643 ALTFIG-ELIIHR 654
            .:..:| |:|.||
  Fly   588 CMGILGLEVIWHR 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 61/346 (18%)
Lig_chan 343..585 CDD:278489 47/279 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.