DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir60a and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:425 Identity:83/425 - (19%)
Similarity:169/425 - (39%) Gaps:79/425 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 VEADCILGLEMRILGFMKNRLKFDVNQTCSLESR-GEMDGPANWTGLLGKVQNNECDFVFGGYYP 345
            :|..||     .:|..:.|:|.|..:.....:.| |:.|...||.|::|:|...|.|....   |
Zfish    43 LEGFCI-----DMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMIGEVVRGEADIAVA---P 99

  Fly   346 ------DNEVADHFWGSDTYLQDAHTWYIK--MADRRPAWQALVGIFEAYTWIGFILILIISWLF 402
                  ...|.|.   |..::|...::.::  :......:.:|:.:|....|:|.::..:::.:.
Zfish   100 LTLTAQREAVVDM---SKPFMQTGLSFIMRKDLGSDDSQFLSLLKLFSTEMWMGVLVAYLLTSIC 161

  Fly   403 WFTLVMILP---EPKYYQQLSLTAINALAVTI-SIAVQ---ERPICETTRLFFMALTLYGLNVVA 460
            .|.:..|.|   |.......|.|..::...|: ::.:|   ..|...:.|:......::.|.::|
Zfish   162 IFLVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSGRVITSIWWIFSLVLLA 226

  Fly   461 TYTSKM------------IATFQDPGYLHQLDELTEVVAAGIPFGGHEESR--DWFENDDDMWIF 511
            .|.:.:            |.||:|....:.::           :|..::|.  ::|:|.::....
Zfish   227 CYFANLSLWLHSDNQQLSIKTFEDLANQNVIE-----------YGTIKDSSSFNFFKNSNNPTYH 280

  Fly   512 NGYNISPEFIPQSKNLEAVKWGQRCILSNRMYTMQSPLADVIYAFPNNVFSSPVQMIMKA----- 571
            ..|....|  .||.:|.|.:..:|....|..:..:|...|:..|...|:..:|..:.|:.     
Zfish   281 RIYEHIKE--AQSYSLNAAEGFRRAQKGNYAFIGESVSLDLAVARYCNLTRAPEIIGMRGYSIAA 343

  Fly   572 --GFPFLFEMNSIIRLMRDVGIFQKIDADFR---YNNTYLNRINKMRPQFPETAIVLTTEHLKGP 631
              |.|.:..::..|..:.:.|   ::|. ||   :.::.:.:.:|..|..|.:        |||.
Zfish   344 PLGSPLIKNLSVAILRLSESG---ELDY-FRSKWWASSCVAKDSKGAPLKPAS--------LKGV 396

  Fly   632 FFILVVGSCWAALTFIGELIIHRWRTQLVSTSEQQ 666
            |.:|..|........:.||..   :::.|:.|||:
Zfish   397 FLLLAFGLGLGIFLALMELAA---KSRKVANSEQK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 68/359 (19%)
Lig_chan 146..396 CDD:278489 49/274 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.