DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and grik1b

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:753 Identity:119/753 - (15%)
Similarity:226/753 - (30%) Gaps:249/753 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IVNLSNETANTVIFMLPEKDLGPDVWKAGVGCLDSFAQIFF-----FRNPKERFT-RAYNLMLVH 82
            |.:.|.:||..|:..|           ..:|.:..:...||     :....|.|. ...|:....
Zfish   255 IFDCSYQTAADVLKQL-----------LSMGMMTEYYHFFFTTLDLYSLDLEPFRYSGVNMTGFR 308

  Fly    83 AFHLSSPADQIQEGFSKLINEAVTNPGPPDREELFQMRVASDYNITNGTEDKGELILADNYVIVV 147
            ..::.:|  |:.....|...|.:..|..|:.            .:.:|.......::.|...:|.
Zfish   309 LLNIDNP--QVASVVEKWSMERLQAPPKPET------------GLQDGMMTTEAALMYDAVYMVA 359

  Fly   148 DSVDRLKELMKKKIV--EMRSWNPGARFLVLFHNATCR--------NRPLGVASNIFKDLMEM-- 200
            .:..|..::....:.  ..:.|..|:||:.:|..|...        |:..|:..:...|::.:  
Zfish   360 AASQRASQITVSSLQCHRHKPWRFGSRFISMFKEAQWNGLTGQIIINKTDGLRKDFDLDIISLKE 424

  Fly   201 --------------------FYVHRVALLYANSTMNYNLLVNDYYSNVNCRILNVQSVGQCHDGK 245
                                .:.....|...:|..:.|..|.|..:|   |.|.|.::.:     
Zfish   425 DGLEKPLESGRFNKVWKKIGVWNSNTGLNLTDSNKDKNTNVTDSMAN---RTLIVTTILE----- 481

  Fly   246 LYPNNAVVKASMQDYVSGFSPRNCTFFACSSISAPFVEADCILGLEMRILGFMKNRLKFDVNQTC 310
                |..|.....|                   .|....|...|..:.:|..:.|.|.|......
Zfish   482 ----NPYVMYKKSD-------------------KPLYGNDRFEGYCLDLLKELSNILGFSYEVKL 523

  Fly   311 SLESR-GEMDGPANWTGLLGKVQNNECDFVFGGYYPDNEVADHFWGSD--------TYLQDAHTW 366
            ..:.: |..:....|.|::                  .|:.||.  :|        ||:::    
Zfish   524 VTDGKYGAQNDKGEWNGMV------------------RELIDHV--ADLAVAPLTITYVRE---- 564

  Fly   367 YIKMADRRPAWQAL-------------VGIFEAYT------W-------IGFILILIISWLF--- 402
              |:.|....:..|             .|:|....      |       :|...:|.:...|   
Zfish   565 --KVIDFSKPFMTLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPY 627

  Fly   403 -WFTLVMILPEPKYYQQLSLTAINALAVTISIAVQE----RPICETTRLFFMALTLYGLNVVATY 462
             |:......|:....:. :.|.||::...:...:|:    .|...:||:.......:.|.::::|
Zfish   628 EWYNPHPCNPDSDVVEN-NFTLINSVWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSY 691

  Fly   463 TSKMIA-----TFQDPGYLHQLDELTEVVAAGIPFGGHEE--SRDWFEND-----DDMWIFNGYN 515
            |:.:.|     ....|  :...|:|.:  ...|.:|...:  :..:|:..     :.||      
Zfish   692 TANLAAFLTVERMDSP--IDSADDLAK--QTKIEYGAVRDGSTMTFFKKSKISTYEKMW------ 746

  Fly   516 ISPEFIPQSKNLEAVKWGQRCILSNRMYTMQSPLADVIYAFPNNVFSSPVQMIMKAGFPFLFEMN 580
               .|:...||...||       :||                     ..:|.::...:..|.|..
Zfish   747 ---AFMSSRKNTALVK-------NNR---------------------EGIQRVLTTDYALLMEST 780

  Fly   581 SIIRL---------------MRDVGIFQKIDADFRYNNTYL-------NRINKMRPQF------P 617
            ||..:               .:..|:...|.:.:|...|..       .:::.|:.::      |
Zfish   781 SIEYISQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCP 845

  Fly   618 E----TAIVLTTEHLKGPFFILVVGSCWAALTFIGELI 651
            |    .|..|..|::.|.|.:|..|...:....|||.|
Zfish   846 EEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFI 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 32/224 (14%)
ANF_receptor 80..423 CDD:279440 31/192 (16%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 70/467 (15%)
Lig_chan 602..871 CDD:278489 50/310 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591585
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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