Sequence 1: | NP_611901.1 | Gene: | Ir60a / 37881 | FlyBaseID: | FBgn0034994 | Length: | 716 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113796.1 | Gene: | Gria1 / 50592 | RGDID: | 621531 | Length: | 907 | Species: | Rattus norvegicus |
Alignment Length: | 542 | Identity: | 99/542 - (18%) |
---|---|---|---|
Similarity: | 176/542 - (32%) | Gaps: | 182/542 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 IVNLSNETANTVIFMLPEKDLGPDVWKAGVGCLDSFAQIFFFRNPKERFTRAYNLMLVHAFHLSS 88
Fly 89 PADQIQE------GFSKLINEAVTNPGPPDREELFQMRVASDYNITNGTEDKGELILADNYVIVV 147
Fly 148 DSVDRLKELMKKKIVEMRSWNPGARFLVLFHNATCRNRPLGVASNIFKDLMEMFYVHRVALLYAN 212
Fly 213 S---TMNYNLLVNDYYSNVNCRILNVQSVGQCH-DGKLYPNNAVVKASMQDYVSGFSPRNCTFFA 273
Fly 274 CSSISAPFVEADCILGLEMRILGFMKNRLKFDVNQTCSLESRGEMDGPANWTGLLGKVQNNECDF 338
Fly 339 VFGGY-YPDNEVADHFWGSDTYLQDAHTWYIKMADRRPAWQALVGIFEAYTWIGFILILIISWLF 402
Fly 403 WFTLVMILPEPKYYQQLSLTAINALAVTISIAVQERPICETTRLFFMALTLYGLNVVATYTSKMI 467
Fly 468 ATFQDPGYLHQLDELTE-----VVAAGI-------------PFGGH----EESRDWFEND--DDM 508
Fly 509 WIFN------------GYNISP 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir60a | NP_611901.1 | None | |||
Gria1 | NP_113796.1 | PBP1_iGluR_AMPA_GluR1 | 26..392 | CDD:380613 | 41/235 (17%) |
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 56/288 (19%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 1/8 (13%) | |||
Glutamate binding. /evidence=ECO:0000250 | 668..669 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 857..881 | ||||
PDZ-binding | 904..907 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349970 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |