DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and CG11155

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:703 Identity:138/703 - (19%)
Similarity:246/703 - (34%) Gaps:188/703 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 YNLMLVHAFHLSSPADQIQEGFSKLINEAV--------TNPGPPDREELFQMRVASDYNITNGTE 132
            ||.:.:.||.|   .|...:.:.::||:..        |..|.|..:....:...|.|...||. 
  Fly   269 YNSVNITAFRL---VDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFANGL- 329

  Fly   133 DKGELILADNYVIVVDSVDRLKELMKKKIVEMRSWNPGARFLVLFH--NATCRNRPLGVAS---- 191
               ..:..||:....     :|.|   .....::||.|   :.|::  ||...:...|...    
  Fly   330 ---HFLNLDNHQNFY-----IKNL---SCTSDQTWNDG---ISLYNQINAAITDGLTGTVQFVEG 380

  Fly   192 --NIFK-DLMEMFYVHRVALLYANSTMNYNLLVNDYYSNVNCRILNVQSVGQCHDGKLYPNNAVV 253
              |||| |::::                              :...:|.||..|     |::.| 
  Fly   381 RRNIFKLDILKL------------------------------KQEKIQKVGYWH-----PDDGV- 409

  Fly   254 KASMQD----YVSGFSPRNCTFFACSSISAPF--VEADCILGLEMRILGFMKNRLKFDVNQTCSL 312
              ::.|    |.|..:  |.|....:....|:  |:.|..|...:|..||..:.||....|. ..
  Fly   410 --NISDPTAFYDSNIA--NITLVVMTREERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQV-GF 469

  Fly   313 ESRGEMDGPAN-----------WTGLLGKVQNNECDFVFGGY---YPDNEVADHFWGSDTYLQDA 363
            :.:.|: .|.|           |.|::.::.....|......   |....|.|.   :..::...
  Fly   470 QYKIEL-VPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDF---TKPFMNLG 530

  Fly   364 HTWYIKMADRRP----------AWQALVGIFEAYTWIGFILILI--ISWLFWFTLVMILPEPKYY 416
            .....|:...:|          |.:..:.:..||..:.|.|.::  .|...|..     |.|.|.
  Fly   531 IGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKN-----PHPCYK 590

  Fly   417 Q------QLSLTAINALAVTISIAVQE----RPICETTRL-----FFMALTL---YGLNVVATYT 463
            :      |.|::  |:........:::    .|...:||:     ||..|.:   |..|:.|..|
  Fly   591 ETDIVENQFSIS--NSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLT 653

  Fly   464 -SKMIATFQDPGYLHQLDELTEVVAAGIPFGGHEESRDWFEND-----DDMWIFNGYNISPEFIP 522
             .:||:..:...   .|.|.|| ::.|...||  .:..:|.:.     ..||.:.....:..|:.
  Fly   654 VERMISPIESAS---DLAEQTE-ISYGTLEGG--STMTFFRDSKIGIYQKMWRYMENRKTAVFVK 712

  Fly   523 QSKNLEAVKWGQRCILSNRMYTMQSPLADVIYAFPNNVFSSPVQMIMKA---------GFPFLFE 578
            ..:  :.:|   |.:..:..:.|:|.:.|  ||...:...:.:..::.:         |.|:..:
  Fly   713 TYE--DGIK---RVMEGSYAFLMESTMLD--YAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDK 770

  Fly   579 MNSIIRLMRDVGIFQKIDADFRYNNT--YLNRINKMRPQFPETAIVLTTEHLKGPFFILVVGSCW 641
            ::..|..:::.||.| |..|..:.||  ..||.:|.:   ...|..|..|::.|.|.:|:.|...
  Fly   771 ISLAILELQEKGIIQ-ILYDKWWKNTGDVCNRDDKSK---ESKANALGVENIGGVFVVLLCGLAL 831

  Fly   642 AALTFIGELIIHRWRTQLVSTSEQQDRRSD--------------KRRRRRRRR 680
            |.:..|.|..   |.::....:|.|...|:              |.|.|.|:|
  Fly   832 AVVVAIFEFC---WNSRKNLNTENQSLCSEMAEELRFAMHCHGSKSRHRPRKR 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 37/196 (19%)
ANF_receptor 61..393 CDD:279440 31/171 (18%)
PBP2_iGluR_Kainate 424..793 CDD:270432 74/394 (19%)
Lig_chan 555..829 CDD:278489 61/297 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463012
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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