DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir60a and Ir56c

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:708 Identity:116/708 - (16%)
Similarity:227/708 - (32%) Gaps:258/708 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AGVGCLDSFAQIFFFRNPKERFTRAYNLMLVHAFHLSSPADQIQEGFSKLINEAVTNPGPPDREE 115
            |..|.::.|.:|.:|.:|.:|..:....::           :|.|.|.|...:.|.|...     
  Fly     9 APFGRMNVFQEIVWFVSPHQRLDQLDEFIM-----------RIDEAFGKSATQTVVNNNT----- 57

  Fly   116 LFQMRVA--------SDYNITNGTEDK-----GELILADN-YVIVVDSVDRLKELMKKKIVEMRS 166
              :||:.        ..:..|.|.||.     .:::|..: ||.:|..||::.::          
  Fly    58 --EMRMIYSSARRNHMSFVFTTGAEDPIMKVFSKVLLGRHFYVSMVIYVDKVGDM---------- 110

  Fly   167 WNPGARFLVLFHNATCRNRPLGVASNIFKDLMEMFYVHRVALL-YANSTMNYNLLVNDYYSNVNC 230
             :|....|...:|....|..:...|  .:.:.::|.|.:..:: :.|.|        |:..    
  Fly   111 -HPIYDLLTFAYNQQFFNSMVHFES--MEGVNQLFGVSKFPVMSFENRT--------DFLK---- 160

  Fly   231 RILNVQSVGQCHDGKLYPNNAVVKASMQDYVSGFSPRNCTFFACSSISAPFVEADCILGLEMRIL 295
                       :.||::..   |:.:..| |.||                               
  Fly   161 -----------YMGKIWKQ---VQNARSD-VGGF------------------------------- 179

  Fly   296 GFMKNRLKFDVNQTCSLESRGEMDGPANWTGLLGKVQNNECDFVFGGYYPDNEVADHFWGSDTYL 360
            || ...|:.|:...  .:|:|..||...      ::......|:.|.:.......|...|....:
  Fly   180 GF-TTPLRQDLPHL--FQSQGHYDGSTY------RIIETFVRFINGSFKELIMPPDSLGGQVINM 235

  Fly   361 QD-------------AHTWYIKMADRR---------PAWQALVGIFEAYTWIGFILILIISWLFW 403
            :|             ||.:.:.|:|..         ..|..:|.::.:.:.. |..:....|..|
  Fly   236 KDALQLIRERKMEFCAHAYALFMSDEELEKSYPLLVVQWCLMVPLYNSVSTY-FYPLQPFDWNVW 299

  Fly   404 F-----TLVMILPEPKYYQQLS------LTAINALAVTISIAVQ---ERPICETTRLFFMALTLY 454
            |     .|.::|.|..:.:...      ...:|:....|::.::   ::| |....|....:..:
  Fly   300 FFALGALLALVLLELMWLRMFGGWSGYRGAVLNSFCYIINVPIEGQLQQP-CLLRFLLLATVFFH 363

  Fly   455 GLNVVATYTSKMIATFQDPGYLHQLDELTEVVAAGIP---------------------------- 491
            |..:.|.|||.:.:......:..|::.:.::|:|.:|                            
  Fly   364 GFFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIIDYEMEFLLNLNKELPQEFLELLRP 428

  Fly   492 -----FGGHEESRDWFEND------DDMWIFNGYNISPEFIPQSKNLEAVKWGQRCILSNRMYTM 545
                 |..|:.|   |.:.      :|.|         ||:.:          |:..|..|::.:
  Fly   429 VDSAVFSEHQTS---FNSSFAYFVTEDHW---------EFLDE----------QQKHLKQRLFKL 471

  Fly   546 QSPLADVIYAFPNNVFSSPVQMIMKAGFPFLFEMNSIIRLMRDVGIFQKIDADFRYNNT------ 604
            .|      ..|.:...:.|:||...              |.||:..|     .||.:::      
  Fly   472 SS------ICFGSYHLAFPLQMDSS--------------LWRDIEYF-----TFRIHSSGLLNFY 511

  Fly   605 ---------YLNRINKMRPQFPETAIVLTT--EHLKGPFFILVVGSCWAALTFIGELI 651
                     :...:.:|    |:|....:.  :||...|.:|:|.|..|.:.|:.|.:
  Fly   512 ARSSFGSALHAGLVQRM----PDTQEYTSAGLQHLAIAFILLLVMSFLAGIVFVLETL 565



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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