DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and Ir25a

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:743 Identity:139/743 - (18%)
Similarity:264/743 - (35%) Gaps:212/743 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LDSFAQIFFFRNPKERFTRAYNLMLVHAFHLSSPADQIQEGFSKLINEAVTNPGPPDREELFQMR 120
            |:|....:|.||      .|::.:..:...:||..|.....|.|.:  |.|.    .|:.|..:|
  Fly   247 LESVKPAYFERN------FAWHAITQNEGEISSQRDNATIMFMKPM--AYTQ----YRDRLGLLR 299

  Fly   121 VASDYNITNGTEDKGELILADNYVIVVDSVDRLKELMKKKIVEMRSWNPGARFLVL--FHNATCR 183
              :.||:    .::.:|..|..:.:.:.|...:||::     :..:|.....:|..  |......
  Fly   300 --TTYNL----NEEPQLSSAFYFDLALRSFLTIKEML-----QSGAWPKDMEYLNCDDFQGGNTP 353

  Fly   184 NRPLGVASNIFK----------DLM----EMFYVHRVALLYANSTMNYNLLVNDYYSNVNCRILN 234
            .|.|.:.....|          ||:    :.|..|.    :....|:.|:|.....|:||.:   
  Fly   354 QRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHS----FMKFEMDINVLQIRGGSSVNSK--- 411

  Fly   235 VQSVGQCHDGKLYPNNAVVKASMQDYVSGFSPRNCT----FFACSSISAPFVEAD---------- 285
              |:|:...|  ..:..:||...|       .:|.|    :...:.:.|||:..|          
  Fly   412 --SIGKWISG--LNSELIVKDEEQ-------MKNLTADTVYRIFTVVQAPFIMRDETAPKGYKGY 465

  Fly   286 CILGLEMRILGFMKNRLKFDVN-QTCSLESRGEMDGPANWTGLLGKVQNNECDFVFG--GYYPDN 347
            ||     .::..:...:.||.. |.......|.||....|.|::.|:.:.:.|...|  ....:.
  Fly   466 CI-----DLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAER 525

  Fly   348 EVADHFWGSDTYLQDAHTWY----IKMADRRPAWQA----LVGIFEAYTWI----GFILILIISW 400
            |:...|         ...:|    |.:..:||:..:    .:.:.|...|:    .:.....:.|
  Fly   526 EIVIDF---------TVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMW 581

  Fly   401 LF--WFTLVMILPEPKYYQ-------------QLSLTAINALAVTISIAVQ---ERPICETTRLF 447
            :|  |        .|..||             :.:|.......:| |:..|   |.|...:.||.
  Fly   582 IFDRW--------SPYSYQNNREKYKDDEEKREFNLKECLWFCMT-SLTPQGGGEAPKNLSGRLV 637

  Fly   448 FMALTLYGLNVVATYTSKM-----IATFQDPGYLHQLDELT---EVVAAGIPFGGHEESRDWFE- 503
            .....|:|..::|:||:.:     ::....|  :..||:|.   :::.|  |..| ..:..:|| 
  Fly   638 AATWWLFGFIIIASYTANLAAFLTVSRLDTP--VESLDDLAKQYKILYA--PLNG-SSAMTYFER 697

  Fly   504 --NDDDMWIFNGYNISPEFIPQSKNLEAVKWGQRCI----LSNRMYT----------MQSPLADV 552
              |.:.|:    |.|..: :..:.:|.||:..:..:    :|:: ||          :.:.|.:.
  Fly   698 MSNIEQMF----YEIWKD-LSLNDSLTAVERSKLAVWDYPVSDK-YTKMWQAMQEAKLPATLDEA 756

  Fly   553 IYAFPNNVFSSPVQMIMKAGFPFLFEMNSIIRLMRDVGIFQKIDADF-----------------R 600
            :....|:..::        ||.||.:...|..|.......|.:..:|                 :
  Fly   757 VARVRNSTAAT--------GFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLKDQ 813

  Fly   601 YNNTYLNRINKM--------------------RPQFPETAIVLTTEHLKGPFFILVVGSCWAALT 645
            :||..|..:||.                    :|:.....|  :.:::.|.|.::.||...|.:|
  Fly   814 FNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGI--SIQNIGGVFIVIFVGIGMACIT 876

  Fly   646 FIGELIIHRWR--TQLVSTSEQQDRRSD 671
            .:.|...:|:|  .:::..:|....||:
  Fly   877 LVFEYWWYRYRKNPRIIDVAEANAERSN 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 42/212 (20%)
PBP2_iGluR_putative 438..836 CDD:270435 78/439 (18%)
Lig_chan 565..870 CDD:278489 59/334 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463016
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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