DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir60a and GRIN2C

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:599 Identity:106/599 - (17%)
Similarity:210/599 - (35%) Gaps:145/599 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 CRNRPLGVASNIFKDLMEMFYVHRVALLYANSTMNYNLLVNDYYSNVNCRILNV------QSVGQ 240
            ||..|..|:     ...|.||.|.:.:.:.....:::  ...|.......::.:      :.||:
Human   392 CRVHPGPVS-----PAREAFYRHLLNVTWEGRDFSFS--PGGYLVQPTMVVIALNRHRLWEMVGR 449

  Fly   241 CHDGKLYPNNAV---VKASMQDYV-------------------------SGFSPR--------NC 269
            ...|.||....|   ..||:|..|                         .|..|.        |.
Human   450 WEHGVLYMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNH 514

  Fly   270 TFFACSSISAPFVEADCILGLEMRILGFMKNRLKFD------VNQTCSLESRGEMDGPANWTGLL 328
            ||  .|...||:.:. |..|..:.||..:...:||.      .|.......||.      |.|::
Human   515 TF--SSGDVAPYTKL-CCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGV------WNGMI 570

  Fly   329 GKVQNNECDFVFGGYYPDNEVADHFWGSDTYLQDAHTWYIKMADRRPAWQALVGIFEAYTWI-GF 392
            |:|.....|...|....:.|.::....|..:::...:..:..::...:..|.:..:....|: .|
Human   571 GEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMF 635

  Fly   393 ILILIISWLFWFTLVMILPEPKYYQQL---------------SLTAINALAVTISIAVQERPICE 442
            ::.|.:..:..|......| ..|.|.|               |:..:.||....|:.: |.|...
Human   636 VMCLTVVAITVFMFEYFSP-VSYNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPI-ENPRGT 698

  Fly   443 TTRLFFMALTLYGLNVVATYTSKMIATFQDPGYLHQLDELTE-----VVAAGIPFGGHEE-SRDW 501
            |:::..:....:.:..:|:||:.:.|......|:..:..|::     :...|:.:...:. ..|:
Human   699 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKSLHLENTGVAWTAFKTFCSDY 763

  Fly   502 FENDDDMW-------IFNG---YNISPEFIPQSKNLEAVKWGQR----CILSNRMYTMQSPLADV 552
            |:...|.:       :.||   .||...:  :..:...||:.||    .:.|.:|.:...|:...
Human   764 FQRPQDQYPPFRFGTVPNGSTERNIRSNY--RDMHTHMVKFNQRSVEDALTSLKMGSEAQPVPRK 826

  Fly   553 IYAFPNNVFSSPV-------------------QMIMKAGFPFLFEMNS---------IIRLMRDV 589
            :.||   ::.:.|                   ::....|:....:.:|         :::.:.| 
Human   827 LDAF---IYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGD- 887

  Fly   590 GIFQKIDADFRYNNTYLNRINKMRPQFPETAIVLTTEHLKGPFFILVVGSCWAALTFIGELIIHR 654
            |..||::..: .:....|..|::      .:..|..:::.|.|::|:|....|.|.|..|.::: 
Human   888 GETQKLETVW-LSGICQNEKNEV------MSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY- 944

  Fly   655 WRTQ-LVSTSEQQD 667
            |:.: .|..|.|.|
Human   945 WKLRHSVPNSSQLD 958



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156156
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.830

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