DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and GRIK5

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:580 Identity:106/580 - (18%)
Similarity:197/580 - (33%) Gaps:160/580 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RNRPLGV------ASNIFKDLMEMFYVHRVALLYANSTMNYNLLVNDY--------------YSN 227
            |::.:||      ::||:.              :..|.|||..:| :|              .:|
Human   323 RSQEIGVKPLACTSANIWP--------------HGTSLMNYLRMV-EYDGLTGRVEFNSKGQRTN 372

  Fly   228 VNCRILNVQSVGQCHDGKLYPNNAV-VKASMQDYVSGFSPRNCTFFACSSISAPFV----EADCI 287
            ...|||.....|....|..|.|..: :.|:..|.....:..|.|....:.:..|:|    ....:
Human   373 YTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQAL 437

  Fly   288 LGLEMRILGFMKNRLKFDVNQTCSLESR---------GEMDGPANWTGLLGKVQNNE-CDFVFGG 342
            .|.| |..||..:.|: ::.:......|         |..:...:|||::|::.|.: .|.....
Human   438 SGNE-RFEGFCVDMLR-ELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAA 500

  Fly   343 Y--YPDNEVADHFWGSDTYLQDAHTWYIKMADRRPAWQALVGIFEAYTWIGFILI--LIISWLF- 402
            :  ..:.|....|......|..:..:.:.|. |:|.:.:.:..|....|: |:|:  |.:|.:. 
Human   501 FTITAEREKVIDFSKPFMTLGISILYRVHMG-RKPGYFSFLDPFSPAVWL-FMLLAYLAVSCVLF 563

  Fly   403 ---------WFTLVMILPEPKYYQQLSLTAINALAVTISIAVQE----RPICETTRLFFMALTLY 454
                     |:.....|....:..:...|..|:|...:...:|:    .|...:||........:
Human   564 LAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAF 628

  Fly   455 GLNVVATYTSKMIA-----TFQDPGYLHQLDELTE-------VVAAGIPFGGHEESRDWFENDDD 507
            .|.::::||:.:.|     ..:.|  :...|:|.:       .:.||......:.||  ::....
Human   629 TLIIISSYTANLAAFLTVQRMEVP--VESADDLADQTNIEYGTIHAGSTMTFFQNSR--YQTYQR 689

  Fly   508 MWIFNGYNISPEFIPQSKNLEAVKWGQRCILSNRMYTMQSPLADVIYAFPNNVFSSPVQMIMKAG 572
            ||.:                                 |||....|   |..:. ...:..::.:.
Human   690 MWNY---------------------------------MQSKQPSV---FVKST-EEGIARVLNSR 717

  Fly   573 FPFLFE--MNSIIRLM-------------RDVGIFQKIDADFRYNNTYL-------NRINKMRPQ 615
            :.||.|  ||...|.:             :..||...:.:.||...|..       ||:..::.:
Human   718 YAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRK 782

  Fly   616 FPE----------TAIVLTTEHLKGPFFILVVGSCWAALTFIGELIIHRWRTQLVSTSEQ 665
            :.|          .|..|..|::.|.|.:|:.|...|....:.|.|   |.|:..:.||:
Human   783 WWEGGRCPKEEDHRAKGLGMENIGGIFIVLICGLIIAVFVAVMEFI---WSTRRSAESEE 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 19/90 (21%)
ANF_receptor 42..379 CDD:279440 14/70 (20%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 70/415 (17%)
Lig_chan 546..816 CDD:278489 52/311 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156162
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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