DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and GRIK3

DIOPT Version :10

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:865 Identity:152/865 - (17%)
Similarity:283/865 - (32%) Gaps:315/865 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 TRAYNLMLVHAFHLSSPA-----DQIQEGFSKLIN----------EAVTNP------------GP 110
            |..|::..:| ||.|..|     ||:..|...:..          :::.|.            .|
Human    78 TLTYDIQRIH-FHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHP 141

  Fly   111 PDREELFQMRVASDY-NITNGTEDKGELILADNYVIVVD---SVDRLKEL--------MKKKIVE 163
            .|.::.|.:.:..|| ::::...|..:.:...:..:|.|   .:.||:||        ::.||.:
Human   142 LDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQ 206

  Fly   164 -----------MRSWNPGARFLVLFHNATCRNRPLGVASNIFKDLMEM----FYVHRVALLYANS 213
                       ::....|..|.::|   .|.:.   :|:.|.|..|.|    .|.|     :..:
Human   207 LPIDSDDSRPLLKEMKRGREFRIIF---DCSHT---MAAQILKQAMAMGMMTEYYH-----FIFT 260

  Fly   214 TMN-YNLLVNDY-YSNVNC---RILNVQSVG---------------------------------- 239
            |:: |.|.:..| ||.||.   |||||.:..                                  
Human   261 TLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAAL 325

  Fly   240 -----------------------QCHDGKLYP-----NNAVVKASMQ------------------ 258
                                   |||..|.:.     .|.:.:|..:                  
Human   326 LYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDF 390

  Fly   259 --DYVS-------------------------GFSPR------NCTFFACSSISAPFV-------- 282
              |.:|                         |..|.      |.:....:.:..|||        
Human   391 DLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRT 455

  Fly   283 -------EADCILGLE--MRILGFMKNRLKFDVNQTCSLESR-------GEMDGPANWTGLLGKV 331
                   |..||..|:  ..||||             |.|.|       |..|....|.|::.::
Human   456 LYGNDRFEGYCIDLLKELAHILGF-------------SYEIRLVEDGKYGAQDDKGQWNGMVKEL 507

  Fly   332 QNNECDFVFGGYYPDN--EVADHFWGSDTYLQDAHTWYIKMADRRP-----------------AW 377
            .:::.|.........:  |.|..|  |..::    |..:.:..|:|                 .|
Human   508 IDHKADLAVAPLTITHVREKAIDF--SKPFM----TLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566

  Fly   378 QALVGIFEAYTWIGFILILI--ISWLFWFTLVMILPEPKYYQQLSLTAINALAVTISIAVQE--- 437
               :.:..||..:..:|.:|  .|...|:......|..:..:. :.|.:|:....:...:|:   
Human   567 ---MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVEN-NFTLLNSFWFGMGSLMQQGSE 627

  Fly   438 -RPICETTRLFFMALTLYGLNVVATYTSKMIA-----TFQDPGYLHQLDELTEVVAAGIPFGGHE 496
             .|...:||:.......:.|.::::||:.:.|     ..:.|  :...|:|.:  ...|.:|..:
Human   628 LMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESP--IDSADDLAK--QTKIEYGAVK 688

  Fly   497 E--SRDWFEND-----DDMWIFNGYNISPEFIPQSKNLEAVKWGQRCILSNRMYTMQSPLADVIY 554
            :  :..:|:..     :.||.|  .:..|..:.:: |.|.:   ||.:.::....|:|  ..:.|
Human   689 DGATMTFFKKSKISTFEKMWAF--MSSKPSALVKN-NEEGI---QRALTADYALLMES--TTIEY 745

  Fly   555 AFPNNVFSSPV-QMIMKAGFPFLFEMNSIIRLMRDVGIFQKIDADFRYNNTYLNRINKMRPQF-- 616
            ....|...:.: .:|...|:.....|.|..|....:.|.|..:.|         :::.|:.::  
Human   746 VTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEED---------KLHIMKEKWWR 801

  Fly   617 ----PE----TAIVLTTEHLKGPFFILVVGSCWAALTFIGELIIHRWRTQLVSTSEQQDRR---- 669
                ||    .|..|..:.:.|.|.:|..|...:.|..:||.:.     :|..|:|::.|.    
Human   802 GSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVY-----KLRKTAEREQRSFCST 861

  Fly   670 -SDKRR-----RRRRRRKPE 683
             :|:.|     :||.:.||:
Human   862 VADEIRFSLTCQRRVKHKPQ 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 57/350 (16%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 72/411 (18%)

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