DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and GRID1

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:790 Identity:148/790 - (18%)
Similarity:257/790 - (32%) Gaps:215/790 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LGPDVWKAGVGCLDSFAQIF--FFRNPKERFTRAYNLMLVHAFHLSSPADQIQEGFSKLINEAV- 105
            ||.||....|.  .:.:.:|  .|...|......|...|..|..|.||     :|....||||| 
Human   188 LGLDVSLQKVD--KNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSP-----QGAHSFINEAVE 245

  Fly   106 TNPGPPDREELFQMRVASDYNITN-----------------GTED-------------------K 134
            ||....|...:|.....||..|.:                 ..:|                   :
Human   246 TNLASKDSHWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCTRNNHRISSLLCDPQE 310

  Fly   135 GEL-ILADNYVIVVDSVDRLKELMKKKIVEMRSWNPGARFLVLFHNATCRNRPLGVASNIFKDLM 198
            |.| :|..:.:.:.|||..|.....:|: |.|.|:..|....:..:....|....:...|.|.  
Human   311 GYLQMLQISNLYLYDSVLMLANAFHRKL-EDRKWHSMASLNCIRKSTKPWNGGRSMLDTIKKG-- 372

  Fly   199 EMFYVHRVALL--------YANSTMNYNLLVNDYYSNVNCRILNVQSVGQCHDGKLYPNNAVVKA 255
                 |...|.        .:|..:.:.:|...|.......:..:.:         :.:...:..
Human   373 -----HITGLTGVMEFREDSSNPYVQFEILGTTYSETFGKDMRKLAT---------WDSEKGLNG 423

  Fly   256 SMQDYVSGFSPRNCTFFACSSISAPFV-EADCILGLEMRILGFMKNRL---------KFDVNQTC 310
            |:|:...|...:..|....:.:..||| .|:.|||...|..||..:.|         |:::.|  
Human   424 SLQERPMGSRLQGLTLKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLDALAKALGFKYEIYQ-- 486

  Fly   311 SLESR-GEMDGPANWTGLLGKVQNNECDFVFGG--YYPDNEVADHFWGSDTYLQDAHTWYIKMAD 372
            :.:.| |......:|.|::|::.:...|.....  ..|:.|....|  |..|:..:....||..:
Human   487 APDGRYGHQLHNTSWNGMIGELISKRADLAISAITITPERESVVDF--SKRYMDYSVGILIKKPE 549

  Fly   373 RRPAWQALVGIFEAYTWIGFILILIISWLFWFTLVMI---------LPEPK-------------- 414
            .:.:..:|...|:...|......:.:..:..|.|..|         .|.|.              
Human   550 EKISIFSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYG 614

  Fly   415 -YYQQLSLTAINALAVTISIAVQERPICETTRLFFMALTLYGLNVVATYTSKM------------ 466
             :.||...:::|::|:               |:...:..|:.|.|.::||:.:            
Human   615 AFVQQGGESSVNSMAM---------------RIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNP 664

  Fly   467 IATFQDPGYLHQLDELTEVVAAGIPFGGHEESR--DWF--------ENDD---DMWIFNGYN--- 515
            |.||||      |.:..|     :.:|...:|.  ::|        |.|.   ::|.....|   
Human   665 IRTFQD------LSKQVE-----MSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGA 718

  Fly   516 ----ISPEFIPQSKNLEAVKWGQRCILSNRMYTMQSPLAD---VIYAFPNNVFSSPVQMIMKAGF 573
                .||     |:.:...|.|....|.:......:.|.|   .:....|::.|....:.::.|.
Human   719 DNCVSSP-----SEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHGS 778

  Fly   574 PFLFEMNSIIRLMRDVGIFQKIDADFRYNNTYLNRINKMRPQFPETAIVLTTEH---------LK 629
            |:....:..|..::|.|     |.|          :.|.: .:|.......|.|         ||
Human   779 PYRDLFSQRILELQDTG-----DLD----------VLKQK-WWPHMGRCDLTSHASAQADGKSLK 827

  Fly   630 -----GPFFILVVGSCWAALTFIGELIIHRW--RTQLVSTSEQQDRRSDKRRRRRRRRKPEKDNR 687
                 |.|.||.:|...|.|....||    |  ..:....:.::|:..:..:..||......::.
Human   828 LHSFAGVFCILAIGLLLACLVAALEL----WWNSNRCHQETPKEDKEVNLEQVHRRMNSLMDEDI 888

  Fly   688 WQRQVQVAPV 697
            ..:|:..|.:
Human   889 AHKQISPASI 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 51/271 (19%)
PBP1_iGluR_delta_1 25..423 CDD:107387 48/258 (19%)
ANF_receptor 41..400 CDD:279440 47/226 (21%)
PBP2_iGluR_delta_1 436..806 CDD:270448 77/420 (18%)
Lig_chan 564..841 CDD:278489 57/323 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155862
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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