DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and glr-8

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:526 Identity:112/526 - (21%)
Similarity:207/526 - (39%) Gaps:125/526 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 YANSTMNYNLL--VNDYYSNVNCRILNVQSVGQCHDGKLYPNNAVVKASMQDYVSGFSPRNCTFF 272
            :.|:|.:.|.:  :|:...::|.::.:.            |..::.    .||...::..|...|
 Worm     6 FENTTADPNSIRTLNNILESINEKVAHP------------PQTSLT----SDYGDAYTLSNEKHF 54

  Fly   273 ACS------------SISAPFVE----ADCIL-------GLEMRILGFMKNRLKFDVNQTCSLES 314
            :.|            :|..|:|.    :|..:       |:.|.||..:..||........:|.|
 Worm    55 SLSEMKGRTLKMVVPAIEPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEILPALGS 119

  Fly   315 R-GE-MDGPANWTGLLGKVQNNECDFVFGG---YYPDNEVADHFWGSDTY-LQDAHTWYIKMADR 373
            . || ::|  :|||..|::...|.|.:.||   .|..:.:||.     || .|...|..:..:..
 Worm   120 TWGEYLNG--SWTGAFGQLVRGEVDLLAGGAIMEYDRSVIADL-----TYPFQFEPTGIMIRSPE 177

  Fly   374 RPAWQALVGIFEAYTWIGFIL---ILIISWLFWFTLVMILPEPKYYQQLSLTAINALAVTISIAV 435
            :.....|:.:.|.::|..:::   :::||.:.:..:..|:  .|.|:::::|...::.|..||.|
 Worm   178 KYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNII--RKVYEEMTVTPFESIWVFFSIFV 240

  Fly   436 Q----ERPICETTRLFFMALTLYGLNVVATYTSKMIATF-----QDPGYLHQLDELTEVVAAGIP 491
            |    |:|...:.|:......|..:.:.||:|..::|.|     ..|  ...:|:|..:|..   
 Worm   241 QQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVP--FQNIDQLVRLVKQ--- 300

  Fly   492 FGGHEESRDWFEND---------------DDMW---IFNGYNISPEFIPQSKNLEAVKWGQRCIL 538
             |..|...|  ||.               .|:|   |.|         .:.|.:..:..|...:.
 Worm   301 -GKFEIVMD--ENSFTRTEMIARSKLPVYRDLWHEMIVN---------HKVKYVNGIARGVAFVR 353

  Fly   539 SNRMYTMQSPLADV-IYAFPN------NVFSSPVQMIMKAGFPFLFEMNSI--------IRLMRD 588
            :|..|.:..|:|.: .||:.:      |....||.:    ..|.:  .|||        ||.|.:
 Worm   354 ANPGYALLGPMATLNFYAYSDCKVILFNDGILPVYL----SIPLV--KNSIYSPYFSTKIREMVE 412

  Fly   589 VGIFQKIDADFRYNNTYLNRINKMRPQFPETAIVLTTEHLKGPFFILVVGSCWAALTFIGELIIH 653
            .|..||..||:| :...:.:||:...........|..:..:|.|::.:.|:......|:||.|..
 Worm   413 RGFTQKWIADYR-SYVAMQKINECNSTTIGPKSYLDLKRAQGAFWVFLGGAGLGLALFVGEFIFK 476

  Fly   654 RWRTQL 659
            .:|.::
 Worm   477 FFREKM 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 89/393 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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