DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and glr-7

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:817 Identity:154/817 - (18%)
Similarity:282/817 - (34%) Gaps:241/817 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PGLIIIIFLGQILNLCQGIVNLSNETANTVIFMLPEKDLGPDVWKAGVGCLDSFAQIFFFRNPKE 70
            ||:..:.....:|.:...|..|...:.|::|.:...:::                         |
 Worm   139 PGIRFVPMETTVLRMRAQITQLRMASINSLILVAKTENV-------------------------E 178

  Fly    71 RFT---------RAYNLMLVHAFHLSSPADQIQEGFSKLINEAVTNPGPPDREELFQMRVASDYN 126
            |||         |.:|..::.....:...|..:..|...:     .|.|..:  |.::|...||.
 Worm   179 RFTLEAADFIEQRVFNTYVLTKDITAFKCDSCESAFMFWL-----RPFPVGK--LMEIRDLDDYL 236

  Fly   127 ITNGTEDKGELILADNYVIVVDSVDRLK-----ELMKKKIVEMRSWNPGARFLVLFHNATCRNRP 186
            ..|      |:.|..:|.|  :..|.|.     .:|......:|:.|  |.|.|| ...||:..|
 Worm   237 FRN------EIGLELDYSI--NGWDSLNVAFYMNVMGYAFETIRTMN--ATFDVL-PTFTCQTGP 290

  Fly   187 L--GVASNIFKDLMEMFYVHRVALLYANSTMNYNLLVNDYYSNVNCRILNVQSVGQCHDGKLYPN 249
            .  .:.:.: :|::.....|.    |.|.|   ...:|.::.:|..||..:.. .:.|:..|:..
 Worm   291 SEPNITTTV-RDIILNDPAHE----YGNYT---EAGLNMFFQDVEVRIYKIDR-DRDHEDALFNK 346

  Fly   250 -----NAVVKASMQDYVSGFSPRNCTFF-ACSSISAPFV----------EADCILGLEMRILGFM 298
                 :.:.|.|:.........||...| ..:.|..|||          |..||         .:
 Worm   347 EVGVWSPISKLSVMYGTLQVDVRNLNIFRVVTLIQPPFVQRTGDPDTPYEGYCI---------DL 402

  Fly   299 KNRLKFDVNQTCSL-----ESRGEMDGPANWTGLLGKV-----------------QNNECDFVFG 341
            .|.::.:||.|.::     .|.|.||...||.||:|.:                 :.|:.||.. 
 Worm   403 INMIQVEVNFTYTIYEVEDGSFGTMDDNGNWNGLIGALVSGSADIALAPLSVMAERENDVDFTV- 466

  Fly   342 GYYPDNEVADHFWGSDTYLQDAHTWY-----IKMADRRPAWQALVGIFEAYTWIGFILILIISWL 401
            .||       ...|:...::.|...|     :|:.: .|.|..:|.   ||.:...:|     |:
 Worm   467 PYY-------DLVGTTILMKKADVEYSLFKFMKVLE-WPVWLCIVA---AYLFTSILL-----WI 515

  Fly   402 F-WFTLVMILPEPKYYQ------QLSLTAINALAVTISIAVQ---ERPICETTRLFFMALTLYGL 456
            | .|:........:.||      |.||.......:| |:..|   |.|...:.||......|:|.
 Worm   516 FDRFSPYSFTNNKERYQNDIEKRQFSLKECLWFCMT-SLTPQGGGEAPKNISGRLVAATWWLFGF 579

  Fly   457 NVVATYTSKM-----IATFQDPGYLHQLDELT---EVVAAGIPFGGHE-------ESRDWFENDD 506
            .::|:||:.:     ::..:.|  :..||:|.   ::..|.|.....|       |..:.|.|  
 Worm   580 IIIASYTANLAAFLTVSRLEQP--ISSLDDLAKQYKIEYAPIKGSASETYFRRMAEIEETFYN-- 640

  Fly   507 DMWIFNGYNISPEFIPQSKNLEAVKWGQRCILSNRM-----YTMQSPLADVIYAFPNNVFSSPVQ 566
             ||  ...:::....|:.:...|| |...  :|::.     |..:|.|       |.|: .:.|.
 Worm   641 -MW--KEMSLNESMSPRDRAKLAV-WDYP--VSDKFTNMWRYMQESKL-------PVNM-DTAVD 691

  Fly   567 MIMKA--GFPFLFEMNSIIRLMRDVGIFQKIDADF-----------------RYNNTYLNRINKM 612
            .::.:  ||.|:.:...|..........|::..:|                 :.::..|..:|:.
 Worm   692 RVLNSVDGFAFIGDATEIKYAALTNCNLQQVGTEFSRKPYAIAVQSGHILKDKISSAILMLLNER 756

  Fly   613 R------------------PQFPETAIVLTTEHLKGPFFILVVGSCWAALTFIGELIIHRWRTQL 659
            |                  |...:.:..::.:::.|.|.:::.|...:.:|...|...:      
 Worm   757 RLETLKEKWWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAGIALSIVTLAFEYYYY------ 815

  Fly   660 VSTSEQQDRRSDKRRRRRRRRKPEKDNRWQRQVQVAP 696
                        ||:.|:...|.:::...::..||.|
 Worm   816 ------------KRKARKAAEKEQEELEMKQSQQVVP 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556 15/110 (14%)
PBP2_iGluR_putative 373..767 CDD:270435 88/438 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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