DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60a and si:dkey-183j2.10

DIOPT Version :9

Sequence 1:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_001923977.1 Gene:si:dkey-183j2.10 / 100151589 ZFINID:ZDB-GENE-130530-729 Length:465 Species:Danio rerio


Alignment Length:447 Identity:81/447 - (18%)
Similarity:137/447 - (30%) Gaps:145/447 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 SRGEMDGPANWTGLLGKVQNNECDFVFGGYYPDNEVADHFWGSDTYLQDAHTWYIKMADRRPAWQ 378
            |.|..|...||.|::|:|...|.|...               :...|..|....:.|.  :|..|
Zfish    77 SYGRQDENGNWNGMIGEVVRGEADLAV---------------APLTLTAAREKAVGMT--KPYMQ 124

  Fly   379 ALVGI-------------------FEAYTWIGFILILIISWLFWFTLVMILP--------EPKYY 416
            ..:.|                   |...||.|.::...::.:....:..:.|        ||.::
Zfish   125 TGISILLRKDIVSEEAGFFDFLSPFSGETWFGILIAYFVTAVCICIVGRLSPCEWSQPETEPNHF 189

  Fly   417 QQLSLTAINALAVTISIAVQERPICETTRLFFMALTLYGLNVVATYTSKMIAT---FQDPGYLHQ 478
            ..|......|.|:::. .....|...:.|:......|:.:.::|.|.|.:.:|   ...|..:..
Zfish   190 TLLHSLWYTAGALSLQ-GAGPHPKAVSGRVISCTWWLFAVVLLACYFSSLSSTQGSDSAPLMIKG 253

  Fly   479 LDELT--EVVAAGIPFGG-------------------HEESRDWFENDDDMWIFNGYNISPEFIP 522
            .::|.  :|:..|...|.                   |.|.|..|.:..|..:......:..||.
Zfish   254 FEDLANQDVIEYGTLAGSSTLAFFKNSNNPSYRRIYEHMERRKSFVSSMDEGVQKAKEGNYAFIG 318

  Fly   523 QSKNLE-AVKWGQRC-------ILSNRMYTMQSPLADVIYAFPNNVFSSPVQMIMKAGFPFLFEM 579
            :|.:|: ||  .:.|       ::..|.|::.:||                      |...|..:
Zfish   319 ESVSLDLAV--ARHCELVRAHEVIGMRGYSIVTPL----------------------GSAMLKNL 359

  Fly   580 NSIIRLMRDVGIFQKIDADFRYNNTYLNRINKMRPQFPETAIV--LTTEHLKGPFFILVVG---- 638
            :..|..:.:.|           ...||..........|:.|..  |....:||.|.:|.:|    
Zfish   360 SVAILQLSEAG-----------ELAYLRTKWWASSCLPDNAKASSLRAHSMKGIFLVLAIGLGIG 413

  Fly   639 ---------------------SCWAALTFIGELIIHRWRTQLVSTSEQQDRRSDKRR 674
                                 ||...||  .||   ..|.::.:|...|| .|||.:
Zfish   414 VLLSLFELTTKSRSAAGEQKKSCCTVLT--QEL---SQRLRMTNTKRDQD-TSDKSK 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60aNP_611901.1 None
si:dkey-183j2.10XP_001923977.1 PBP2_iGluR_non_NMDA_like 28..381 CDD:270403 60/356 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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