DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CATSPER4 and cacna1ha

DIOPT Version :10

Sequence 1:NP_937770.1 Gene:CATSPER4 / 378807 HGNCID:23220 Length:472 Species:Homo sapiens
Sequence 2:XP_073800984.1 Gene:cacna1ha / 560875 ZFINID:ZDB-GENE-130103-1 Length:2301 Species:Danio rerio


Alignment Length:328 Identity:78/328 - (23%)
Similarity:142/328 - (43%) Gaps:69/328 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    72 DAWDMQEFITH----MYIKQLLRHPAFQLLLALLLVINAITIALRTNSYLDQKHYELFSTIDDIV 132
            :.|.:..|..|    |..::|:.|..|..::.:.:.:|.|||||. ..::.|.. .||..:.:.|
Zfish  1230 EEWSLYLFSPHNKFRMMCQKLISHKMFDYVVLVFIFLNCITIALE-RPHIQQSE-RLFLLVSNYV 1292

Human   133 LTILLCE------VLLGWLNGFWIFWKDGWNILNFIIVFILLLRFFINEINIPSINYT------- 184
            .|::...      |.||:.:|...:.|..||:|:.::||:.|:...:      |:.:|       
Zfish  1293 FTVIFVAEMTVKVVALGFYSGNQSYLKSTWNVLDGVLVFVSLIDILV------SLAWTGNRIFGI 1351

Human   185 LRALRLVHVCMAVEPLAR------IIRVILQSVPDMANIMVLILFFMLVFSVFGVTLF-GAFV-- 240
            ||.|||:.....:..::|      ::..::.|:..:.||:::...|.:||.:.||.|| |.|.  
Zfish  1352 LRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFFHC 1416

Human   241 ------------------------PKHFQNIQVALYTLFICITQDGWVDI-YS-------DFQTE 273
                                    ..:|.|:..||.:||:...:||||:| |.       |.|.|
Zfish  1417 EGGDTRNITNKSDCLQANLKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPE 1481

Human   274 KREYAMEIGGAIYFTIFITIGAFIGINLFVIVVTTNLEQMMKAGEQGQQQRITFSETGAEEEEEN 338
            :......:   :||..|:.|.:|..:|:||.||..|..:..:..|:.:.:.:........|::..
Zfish  1482 RNHNPWML---LYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEVEARLLELKRQKLMEKKRR 1543

Human   339 DQL 341
            ..|
Zfish  1544 KAL 1546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CATSPER4NP_937770.1 Ion_trans 91..313 CDD:459842 70/275 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..438
cacna1haXP_073800984.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.