DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNS2 and kcnv2b

DIOPT Version :10

Sequence 1:NP_065748.1 Gene:KCNS2 / 3788 HGNCID:6301 Length:477 Species:Homo sapiens
Sequence 2:NP_001122212.1 Gene:kcnv2b / 567780 ZFINID:ZDB-GENE-060526-28 Length:527 Species:Danio rerio


Alignment Length:480 Identity:165/480 - (34%)
Similarity:264/480 - (55%) Gaps:33/480 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     5 SLWDVSEANVEDGEIRINVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREF 69
            :||..|.:...:..:.:||||...|:......|:|:||||||.:.......::|||||.....|:
Zfish    68 TLWFTSTSPSRNCTLNLNVGGKSYRITYKMAARYPQTRLGRLAMSTDLNMKMDLCDDYVVKDNEY 132

Human    70 YFDRNPELFPYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEK 134
            :|||:|::|..:.:||.||.|.:..|||..:|.:||.|||:...:...||....        :||
Zfish   133 FFDRDPDVFNSIFNFYRTGVLWIKDELCPRNFLEEISYWGVRIKYSQRCCRILL--------EEK 189

Human   135 WDEQSDQESTTSSFDEILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSILSILVVMG 199
            .||..:|.......:..|....:...||...||..||.||..::.|..|:.:::.::.|.:.|:.
Zfish   190 NDELCEQLKVQKELERELEIEENEEAFDDMILGESRRSLWDFMEKPFSSIPAKLMAVTSSMFVLI 254

Human   200 SIITMCLNSLPDFQIPDSQG-NPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLI 263
            |::||.|:::.:.:..:|:| |.|     |.||:..|.:||.|.:.|....||..:|||:.||.:
Zfish   255 SLVTMTLSTVEEMENIESEGKNYG-----EFVENLCITFFTIEYLLRVISTPDICRFFKSMLNAV 314

Human   264 DLMSIVPFYITLVV-----------NLVVESTPTLANLGRVAQVLRLMRIFRILKLARHSTGLRS 317
            |||:|:|..:..::           :..:|:...:..:|:|.:::||:||||:|||||||||||:
Zfish   315 DLMAILPQILQFMLENFETFGSRNQSADMETVGQVGKVGQVLRIMRLLRIFRVLKLARHSTGLRA 379

Human   318 LGATLKYSYKEVGLLLLYLSVGISIFSVVAYTIEKE-ENEGLATIPACWWWATVSMTTVGYGDVV 381
            .|.|||..|::||.|.|::::||..||.:.|::|.: ......:||..||||:||::||||||:.
Zfish   380 FGFTLKQCYQQVGCLFLFIAMGIFTFSAMVYSVEYDVPKTNFTSIPHSWWWASVSISTVGYGDMY 444

Human   382 PGTTAGKLTASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRD 446
            |.|..|::.|..||..||::..|||:::|||||.:|.:.|..|....       ||...:||...
Zfish   445 PETLLGRIFAFGCISFGIILNGLPISILFNKFSDYYAKLKSHECPSH-------MKNRGNVNFIP 502

Human   447 YYAHKVKSLMASLTNMSRSSPSELS 471
            ....|::......||...:..:.:|
Zfish   503 RAKKKLRECGCIETNDDTNDDTNVS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNS2NP_065748.1 BTB_POZ_KCNS2 18..124 CDD:349734 40/105 (38%)
Ion_trans 186..421 CDD:459842 96/247 (39%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 4/4 (100%)
kcnv2bNP_001122212.1 BTB_POZ 82..189 CDD:453885 40/114 (35%)
Ion_trans 241..484 CDD:459842 96/247 (39%)

Return to query results.
Submit another query.