DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11406 and LIP1

DIOPT Version :10

Sequence 1:NP_001014548.1 Gene:CG11406 / 37877 FlyBaseID:FBgn0034990 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_179126.2 Gene:LIP1 / 816012 AraportID:AT2G15230 Length:393 Species:Arabidopsis thaliana


Alignment Length:388 Identity:122/388 - (31%)
Similarity:192/388 - (49%) Gaps:53/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DSLCTRSDSVCQAVQRQQLQCQVHRIETADGYRLSLHRIPA--PQNRWCPQQLRPFLLMHGLLGS 77
            :|||      ...:......|..|.|:|.|||.|:|.|:.:  |:.:..|    |.||.|||. .
plant    30 NSLC------ADLIHPANYSCTEHSIQTKDGYILALQRVASLGPRLQSGP----PVLLQHGLF-M 83

  Fly    78 AGD--FVSGGRGRSLALELHARCFDVWLANARGTTHSRGHRTLQTSDARFWRFSWHEIGIYDLPA 140
            |||  |::..: .||...|....||||:.|.|||.:|.||.||..:|..||.:||.::.:|||..
plant    84 AGDVWFLNSPK-ESLGFILADHGFDVWVGNVRGTRYSYGHVTLSDTDKEFWDWSWQDLAMYDLAE 147

  Fly   141 IVDYVLARTNRRQLHYVGHSQGTTVLLVLLSQRPEYNARFANAALLAPVAFLQHLSSPPLRLLAS 205
            ::.|:.:.:|.: :..|||||||.:....|:| |........||||.|:::|.|:::|.:     
plant   148 MIQYLYSISNSK-IFLVGHSQGTIMSFAALTQ-PHVAEMVEAAALLCPISYLDHVTAPLV----- 205

  Fly   206 DSSMATLLLNK----LGLHELLPASALTQVGGQFFCTASRPTYALCTLFTSVYVGFS-------- 258
             ..|..:.|::    ||||::...|.:........|..    :..||.|.:...|.:        
plant   206 -ERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLCEG----HMDCTDFLTSITGTNCCFNASKI 265

  Fly   259 DYPLDRSILPRILETTPAGISRGQLQHFGQLINSGKFQQYDYRSPRLNTLRYGRTTPPSYQLANV 323
            :|.||       .|..|:.:.  .::|..|:|..|.|.||||...: |...||.:.||.:.|:::
plant   266 EYYLD-------YEPHPSSVK--NIRHLFQMIRKGTFAQYDYGYFK-NLRTYGLSKPPEFILSHI 320

  Fly   324 RLQLQIF--HGSRDTLSSLADVQRLVRELRNSVTQMYQVPGYNHIDFLFASSAPQVVFQRIIQ 384
            ...|.::  :|..|.|:.:.||:..:.||.:|...:| :..|.||||:..|||.:.|::.:||
plant   321 PASLPMWMGYGGTDGLADVTDVEHTLAELPSSPELLY-LEDYGHIDFVLGSSAKEDVYKHMIQ 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11406NP_001014548.1 PLN02872 22..384 CDD:215470 117/379 (31%)
LIP1NP_179126.2 PLN02872 6..393 CDD:215470 122/388 (31%)

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