DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11406 and Lipo4

DIOPT Version :10

Sequence 1:NP_001014548.1 Gene:CG11406 / 37877 FlyBaseID:FBgn0034990 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001310315.1 Gene:Lipo4 / 628236 MGIID:3779637 Length:398 Species:Mus musculus


Alignment Length:364 Identity:114/364 - (31%)
Similarity:192/364 - (52%) Gaps:11/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SVCQAVQRQQLQCQVHRIETADGYRLSLHRIPAPQNR---WCPQQLRPFLLMHGLLGSAGDFVSG 84
            :|.|.::..:...:.:.:.|.|||.|.::|||..:|.   ..|:.:  ....||||.:.|.:||.
Mouse    32 NVSQIIKHWEYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMV--VFCQHGLLATPGAWVSN 94

  Fly    85 GRGRSLALELHARCFDVWLANARGTTHSRGHRTLQTSDARFWRFSWHEIGIYDLPAIVDYVLART 149
            ....|||..|....:|||:.::||:|.::.|.||.|....||.||:.::..|||||.::::|.:|
Mouse    95 LPDNSLAFILADAGYDVWMGSSRGSTWAKKHVTLNTDSKEFWDFSFDQMIKYDLPATINFILDKT 159

  Fly   150 NRRQLHYVGHSQGTTVLLVLLSQRPEYNARFANAALLAPVAFLQHLSSPPLRLLASDSSMATLLL 214
            .::|::|:||||||.:.:...:...:...:.....||||:..:||  |..:..|.|..:..|:.:
Mouse   160 GQKQIYYIGHSQGTLIAIGAFATNQKLAEKIKLNILLAPIYSVQH--SKGIARLTSYLTPTTIKV 222

  Fly   215 NKLGLHELLPASALTQVGGQFFCTASRPTYALCTLFTSVYVGFSDYPLDRSILPRILETTPAGIS 279
             ..|..|.||....::||. :.|..:..| |.|........|:|...|:.|.|...::...||.|
Mouse   223 -LFGEKEFLPTVVSSEVGA-YVCDINLVT-AGCAAMIGSMGGYSPEQLNMSRLDVYVKLNLAGTS 284

  Fly   280 RGQLQHFGQLINSGKFQQYDYRSPRLNTLRYGRTTPPSYQLANVRLQLQIFHGSRDTLSSLADVQ 344
            ...|.|:.|:..||..|.||:.|..||...|.:||||.|.:.::::...:|.|.:|.||...||:
Mouse   285 VKILIHYNQIRRSGILQAYDWGSSSLNMQHYNQTTPPVYNVEDMKVPTAMFTGLKDFLSDPEDVE 349

  Fly   345 RLVRELRNSVTQMYQVPGYNHIDFLFASSAPQVVFQRII 383
            .|..::.| :|.:..:|.::|.||::..:|.:.|.:.|:
Mouse   350 ILKPKIHN-LTYLKTIPDFSHFDFIWGLNAREEVSEEIL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11406NP_001014548.1 PLN02872 22..384 CDD:215470 114/364 (31%)
Lipo4NP_001310315.1 PLN02872 34..391 CDD:215470 113/362 (31%)

Return to query results.
Submit another query.